ENSG00000261609


Homo sapiens

Features
Gene ID: ENSG00000261609
  
Biological name :GAN
  
Synonyms : GAN / gigaxonin / Q9H2C0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q23.2
Gene start: 81314952
Gene end: 81390884
  
Corresponding Affymetrix probe sets: 220124_at (Human Genome U133 Plus 2.0 Array)   228567_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000476795
NCBI entrez gene - 8139     See in Manteia.
OMIM - 605379
RefSeq - XM_017023734
RefSeq - NM_022041
RefSeq Peptide - NP_071324
swissprot - Q9H2C0
swissprot - A0A0S2Z4W2
Ensembl - ENSG00000261609
  
Related genetic diseases (OMIM): 256850 - Giant axonal neuropathy-1, 256850
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GANENSDARG00000100875Danio rerio
 GANENSGALG00000013437Gallus gallus
 GanENSMUSG00000052557Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KLHL9 / Q9P2J3 / kelch like family member 9ENSG0000019864224
KLHL13 / Q9P2N7 / kelch like family member 13ENSG0000000309624
IPP / Q9Y573 / intracisternal A particle-promoted polypeptideENSG0000019742924
KLHL36 / Q8N4N3 / kelch like family member 36ENSG0000013568623
KLHL14 / Q9P2G3 / kelch like family member 14ENSG0000019770523
KLHL26 / Q53HC5 / kelch like family member 26ENSG0000016748723
KLHL31 / Q9H511 / kelch like family member 31ENSG0000012474323
KLHL32 / Q96NJ5 / kelch like family member 32ENSG0000018623122
KLHL34 / Q8N239 / kelch like family member 34ENSG0000018591521
KLHL15 / Q96M94 / kelch like family member 15ENSG0000017401021
KLHL22 / Q53GT1 / kelch like family member 22ENSG0000009991020
KLHL7 / Q8IXQ5 / kelch like family member 7ENSG0000012255020
Q9Y6Y0 / IVNS1ABP / influenza virus NS1A binding proteinENSG0000011667920
A6NCF5 / KLHL33 / kelch like family member 33ENSG0000018527119


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR006652  Kelch repeat type 1
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR011705  BTB/Kelch-associated
 IPR015915  Kelch-type beta propeller
 IPR017096  BTB-kelch protein
 IPR030579  Gigaxonin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043687 post-translational protein modification TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0031463 Cul3-RING ubiquitin ligase complex IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0001155 Abnormality of the hand "An abnormality affecting one or both hands." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001317 Abnormality of the cerebellum 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001382 Joint hypermobility "The ability of a joint to move beyond its normal range of motion." [HPO:curators]
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 HP:0001761 Pes cavus 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0002062 Abnormality of the pyramidal tracts "An abnormality of the pyramidal system of motor neurons, whose chief element, the corticospinal tract, is the only direct connection between the brain and the spinal cord. In addition to the corticospinal tract, the pyramidal system includes the corticobulbar, corticomesencephalic, and corticopontine tracts." [HPO:curators]
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 HP:0002212 Curly hair 
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 HP:0002224 Woolly hair 
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 HP:0002235 Pili canaliculi "Uncombable hair." [HPO:probinson]
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 HP:0002317 Unsteady gait 
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 HP:0002355 Difficulty walking 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002522 Areflexia in lower limbs 
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 HP:0002527 Falls 
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 HP:0002600 Hyporeflexia of lower limbs 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002857 Genu valgum 
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 HP:0002936 Distal sensory impairment 
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 HP:0003376 Steppage gait "An abnormal gait pattern that arises from weakness of the pretibial and peroneal muscles due to a lower motor neuron lesion. Affected patients have footdrop and are unable to dorsiflex and evert the foot. The leg is lifted high on walking so that the toes clear the ground, and there may be a slapping noise when the foot strikes the ground again." [HPO:curators]
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 HP:0003380 Decreased number of myelinated fibers "A loss of myelinated nerve fibers (in general, this finding can be observed on nerve biopsy)." [HPO:curators]
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 HP:0003390 Sensory axonal neuropathy "An axonal neuropathy of peripheral sensory nerves." [HPO:curators]
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 HP:0003405 Diffuse axonal swelling 
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 HP:0003429 Hypomyelination 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003621 Juvenile onset 
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 HP:0003677 Slow progression 
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 HP:0003690 Limb muscle weakness "Weakness of the muscles of the arms and legs." [HPO:curators]
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0003812 Phenotypic variability 
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 HP:0005109 Abnormality of the Achilles tendon 
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 HP:0005922 Abnormal hand morphology 
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 HP:0007002 Sensory and motor axonal neuropathy 
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 HP:0007256 Mild pyramidal signs 
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 HP:0010628 Facial muscle weakness "A weakness of any or all of the muscles of the face of any etiology." [HPO:curators]
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 HP:0012503 Abnormality of the pituitary gland "An anomaly of the `pituitary gland` (FMA:13889)." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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