ENSGALG00000000991


Gallus gallus

Features
Gene ID: ENSGALG00000000991
  
Biological name :TAF12
  
Synonyms : TAF12 / TATA-box binding protein associated factor 12
  
Possible biological names infered from orthology : Q16514 / Q8VE65 / Transcription initiation factor TFIID subunit 12
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 2257261
Gene end: 2263245
  
Corresponding Affymetrix probe sets: Gga.11173.1.A1_at (Chicken Array)   Gga.3980.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001461
NCBI entrez gene - 419585     See in Manteia.
RefSeq - NM_001030894
RefSeq - XM_015297648
RefSeq Peptide - NP_001026065
swissprot - Q5ZKX3
Ensembl - ENSGALG00000000991
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf12ENSDARG00000104030Danio rerio
 TAF12ENSG00000120656Homo sapiens
 Taf12ENSMUSG00000028899Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003228  Transcription initiation factor TFIID subunit 12 domain
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 biological_processGO:0043966 histone H3 acetylation IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0051123 RNA polymerase II transcriptional preinitiation complex assembly IBA
 cellular_componentGO:0000124 SAGA complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005669 transcription factor TFIID complex IBA
 cellular_componentGO:0030914 STAGA complex IEA
 cellular_componentGO:0033276 transcription factor TFTC complex IEA
 cellular_componentGO:0046695 SLIK (SAGA-like) complex IEA
 molecular_functionGO:0001102 RNA polymerase II activating transcription factor binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0004402 histone acetyltransferase activity IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0017025 TBP-class protein binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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