ENSMUSG00000028899


Mus musculus

Features
Gene ID: ENSMUSG00000028899
  
Biological name :Taf12
  
Synonyms : Q8VE65 / Taf12 / Transcription initiation factor TFIID subunit 12
  
Possible biological names infered from orthology : Q16514 / TATA-box binding protein associated factor 12
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D2.3
Gene start: 132274375
Gene end: 132295766
  
Corresponding Affymetrix probe sets: 10508711 (MoGene1.0st)   1423398_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030731
Ensembl peptide - ENSMUSP00000101583
NCBI entrez gene - 66464     See in Manteia.
MGI - MGI:1913714
RefSeq - XM_017320350
RefSeq - NM_025579
RefSeq - XM_006539107
RefSeq - XM_006539109
RefSeq - XM_006539110
RefSeq Peptide - NP_079855
swissprot - Q8VE65
swissprot - E9QNT5
Ensembl - ENSMUSG00000028899
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf12ENSDARG00000104030Danio rerio
 TAF12ENSGALG00000000991Gallus gallus
 TAF12ENSG00000120656Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003228  Transcription initiation factor TFIID subunit 12 domain
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 biological_processGO:0043966 histone H3 acetylation IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0051123 RNA polymerase II transcriptional preinitiation complex assembly IBA
 cellular_componentGO:0000124 SAGA complex IEA
 cellular_componentGO:0000125 PCAF complex ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 cellular_componentGO:0030914 STAGA complex IEA
 cellular_componentGO:0033276 transcription factor TFTC complex IEA
 cellular_componentGO:0046695 SLIK (SAGA-like) complex IEA
 molecular_functionGO:0001102 RNA polymerase II activating transcription factor binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0004402 histone acetyltransferase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0017025 TBP-class protein binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
Regulation of TP53 Activity through Phosphorylation
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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