ENSGALG00000001489


Gallus gallus

Features
Gene ID: ENSGALG00000001489
  
Biological name :SSU72
  
Synonyms : Q5ZJQ7 / RNA polymerase II subunit A C-terminal domain phosphatase SSU72 / SSU72
  
Possible biological names infered from orthology : Q9CY97 / SSU72P2 / SSU72P3 / SSU72P4 / SSU72P5 / SSU72P7 / SSU72P8 / SSU72 pseudogene 2 / SSU72 pseudogene 3 / SSU72 pseudogene 4 / SSU72 pseudogene 5 / SSU72 pseudogene 7 / SSU72 pseudogene 8
  
Species: Gallus gallus
  
Chr. number: 21
Strand: 1
Band:
Gene start: 2113222
Gene end: 2135244
  
Corresponding Affymetrix probe sets: Gga.9388.1.S1_at (Chicken Array)   GgaAffx.12480.1.S1_at (Chicken Array)   GgaAffx.20197.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002256
Ensembl peptide - ENSGALP00000059368
Ensembl peptide - ENSGALP00000058691
NCBI entrez gene - 419410     See in Manteia.
RefSeq - NM_001007875
RefSeq Peptide - NP_001007876
swissprot - A0A1L1RKS6
swissprot - A0A1L1RIW7
swissprot - Q5ZJQ7
Ensembl - ENSGALG00000001489
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ssu72ENSDARG00000031216Danio rerio
 SSU72P2ENSG00000284306Homo sapiens
 SSU72P3ENSG00000284546Homo sapiens
 SSU72P4ENSG00000283873Homo sapiens
 SSU72P5ENSG00000284018Homo sapiens
 SSU72P7ENSG00000284438Homo sapiens
 SSU72P8ENSG00000230268Homo sapiens
 Ssu72ENSMUSG00000029038Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006811  RNA polymerase II subunit A
 IPR023485  Phosphotyrosine protein phosphatase I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006369 termination of RNA polymerase II transcription IBA
 biological_processGO:0006378 mRNA polyadenylation IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0070940 dephosphorylation of RNA polymerase II C-terminal domain IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005847 mRNA cleavage and polyadenylation specificity factor complex IBA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0008420 CTD phosphatase activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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