ENSMUSG00000029038


Mus musculus

Features
Gene ID: ENSMUSG00000029038
  
Biological name :Ssu72
  
Synonyms : Q9CY97 / RNA polymerase II subunit A C-terminal domain phosphatase SSU72 / Ssu72
  
Possible biological names infered from orthology : Q9NP77 / SSU72 homolog, RNA polymerase II CTD phosphatase
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: E2
Gene start: 155704800
Gene end: 155733879
  
Corresponding Affymetrix probe sets: 10511139 (MoGene1.0st)   1425674_a_at (Mouse Genome 430 2.0 Array)   1431090_at (Mouse Genome 430 2.0 Array)   1446225_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030905
Ensembl peptide - ENSMUSP00000101220
NCBI entrez gene - 68991     See in Manteia.
MGI - MGI:1916241
RefSeq - XM_011250329
RefSeq - NM_026899
RefSeq Peptide - NP_081175
swissprot - Q9CY97
Ensembl - ENSMUSG00000029038
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ssu72ENSDARG00000031216Danio rerio
 SSU72ENSGALG00000001489Gallus gallus
 SSU72ENSG00000160075Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006811  RNA polymerase II subunit A
 IPR036196  Phosphotyrosine protein phosphatase I superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006369 termination of RNA polymerase II transcription IBA
 biological_processGO:0006378 mRNA polyadenylation ISS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0070940 dephosphorylation of RNA polymerase II C-terminal domain ISO
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0005847 mRNA cleavage and polyadenylation specificity factor complex IBA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0008420 CTD phosphatase activity ISS
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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