ENSGALG00000001741


Gallus gallus

Features
Gene ID: ENSGALG00000001741
  
Biological name :NPTN
  
Synonyms : neuroplastin precursor / NPTN
  
Possible biological names infered from orthology : neuroplastin / P97300 / Q9Y639
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 2113805
Gene end: 2160818
  
Corresponding Affymetrix probe sets: Gga.9823.1.S1_s_at (Chicken Array)   GgaAffx.1143.1.S1_s_at (Chicken Array)   GgaAffx.21368.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054541
Ensembl peptide - ENSGALP00000002670
NCBI entrez gene - 415316     See in Manteia.
RefSeq - XM_015278826
RefSeq - NM_001293209
RefSeq - XM_015278824
RefSeq - XM_015278825
RefSeq Peptide - NP_001280138
swissprot - F1NI46
swissprot - A0A1D5PNU7
Ensembl - ENSGALG00000001741
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nptnaENSDARG00000103002Danio rerio
 nptnbENSDARG00000043864Danio rerio
 NPTNENSG00000156642Homo sapiens
 NptnENSMUSG00000032336Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BSG / P17790 / Basigin / P18572* / P35613* / basigin (Ok blood group)*ENSGALG0000000132841
EMB / embigin / P21995* / Q6PCB8*ENSGALG0000001487719


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR027112  Neuroplastin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050804 modulation of chemical synaptic transmission IEA
 biological_processGO:0050808 synapse organization IEA
 biological_processGO:1902683 regulation of receptor localization to synapse IEA
 biological_processGO:1904861 excitatory synapse assembly IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030425 dendrite IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr