ENSGALG00000001852


Gallus gallus

Features
Gene ID: ENSGALG00000001852
  
Biological name :LRWD1
  
Synonyms : leucine rich repeats and WD repeat domain containing 1 / LRWD1
  
Possible biological names infered from orthology : Leucine-rich repeat and WD repeat-containing protein 1 / Q8BUI3 / Q9UFC0
  
Species: Gallus gallus
  
Chr. number: 19
Strand: 1
Band:
Gene start: 4128855
Gene end: 4140535
  
Corresponding Affymetrix probe sets: Gga.12445.1.S1_at (Chicken Array)   Gga.12445.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002866
NCBI entrez gene - 417511     See in Manteia.
RefSeq - XM_015295999
RefSeq - XM_015296000
RefSeq - XM_415759
swissprot - E1BZ62
Ensembl - ENSGALG00000001852
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrwd1ENSDARG00000035147Danio rerio
 LRWD1ENSG00000161036Homo sapiens
 Lrwd1ENSMUSG00000029703Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR025875  Leucine rich repeat 4
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0071169 establishment of protein localization to chromatin IEA
 cellular_componentGO:0000776 kinetochore IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005664 nuclear origin of replication recognition complex IEA
 cellular_componentGO:0005721 pericentric heterochromatin IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0031933 telomeric heterochromatin IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0008327 methyl-CpG binding IEA
 molecular_functionGO:0035064 methylated histone binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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