ENSMUSG00000029703


Mus musculus

Features
Gene ID: ENSMUSG00000029703
  
Biological name :Lrwd1
  
Synonyms : Leucine-rich repeat and WD repeat-containing protein 1 / Lrwd1 / Q8BUI3
  
Possible biological names infered from orthology : leucine rich repeats and WD repeat domain containing 1 / Q9UFC0
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: G2
Gene start: 136122772
Gene end: 136136074
  
Corresponding Affymetrix probe sets: 10534551 (MoGene1.0st)   1428144_at (Mouse Genome 430 2.0 Array)   1437194_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000121513
Ensembl peptide - ENSMUSP00000006301
Ensembl peptide - ENSMUSP00000119546
NCBI entrez gene - 71735     See in Manteia.
MGI - MGI:1918985
RefSeq - NM_027891
RefSeq Peptide - NP_082167
swissprot - Q8BUI3
swissprot - F6RP62
swissprot - H9KV12
Ensembl - ENSMUSG00000029703
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrwd1ENSDARG00000035147Danio rerio
 LRWD1ENSGALG00000001852Gallus gallus
 LRWD1ENSG00000161036Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001680  WD40 repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR025875  Leucine rich repeat 4
 IPR032675  Leucine-rich repeat domain superfamily
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006325 chromatin organization ISO
 biological_processGO:0071169 establishment of protein localization to chromatin IEA
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0000776 kinetochore ISO
 cellular_componentGO:0000777 condensed chromosome kinetochore IEA
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005664 nuclear origin of replication recognition complex IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005721 pericentric heterochromatin IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0031933 telomeric heterochromatin IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008327 methyl-CpG binding IEA
 molecular_functionGO:0035064 methylated histone binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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