ENSGALG00000002413


Gallus gallus

Features
Gene ID: ENSGALG00000002413
  
Biological name :CELF4
  
Synonyms : CELF4 / CUGBP Elav-like family member 4
  
Possible biological names infered from orthology : Q7TSY6 / Q9BZC1
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 6773306
Gene end: 6853237
  
Corresponding Affymetrix probe sets: GgaAffx.1610.1.S1_at (Chicken Array)   GgaAffx.1610.1.S1_s_at (Chicken Array)   GgaAffx.1610.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003792
NCBI entrez gene - 426889     See in Manteia.
RefSeq - XM_004937077
RefSeq - XM_004937078
RefSeq - XM_015277427
RefSeq - XM_015277428
RefSeq - XM_015277429
RefSeq - XM_015277430
RefSeq - XM_015277431
RefSeq - XM_424495
RefSeq - XM_003642925
swissprot - F1NYP4
Ensembl - ENSGALG00000002413
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01018956.1ENSDARG00000114049Danio rerio
 CELF4ENSG00000101489Homo sapiens
 Celf4ENSMUSG00000024268Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CELF6* / Q7TN33* / Q96J87* / AC009690.3* / CUGBP Elav-like family member 6*ENSGALG0000003131384
CELF3* / Q5SZQ8* / Q8CIN6* / CUGBP Elav-like family member 3* / Mus musculus CUGBP, Elav-like family member 3 (Celf3), transcript variant 8, mRNA.*ENSGALG0000002847868
CELF5 / CUGBP Elav-like family member 5 / Q8N6W0*ENSGALG0000002671662
CELF2 / CUGBP Elav-like family member 2 / O95319* / Q9Z0H4*ENSGALG0000003459049
CELF1 / CUGBP Elav-like family member 1 / P28659* / Q92879*ENSGALG0000000809749
ENSGALG000000389300


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000380 alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0006376 mRNA splice site selection IEA
 biological_processGO:0048025 negative regulation of mRNA splicing, via spliceosome IEA
 biological_processGO:0048026 positive regulation of mRNA splicing, via spliceosome IEA
 biological_processGO:0090394 negative regulation of excitatory postsynaptic potential IEA
 biological_processGO:1902866 regulation of retina development in camera-type eye IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0036002 pre-mRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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