ENSGALG00000026716


Gallus gallus

Features
Gene ID: ENSGALG00000026716
  
Biological name :CELF5
  
Synonyms : CELF5 / CUGBP Elav-like family member 5
  
Possible biological names infered from orthology : Q8N6W0
  
Species: Gallus gallus
  
Chr. number: 28
Strand: 1
Band:
Gene start: 1295618
Gene end: 1324534
  
Corresponding Affymetrix probe sets: GgaAffx.11313.1.S1_at (Chicken Array)   GgaAffx.11328.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042824
Ensembl peptide - ENSGALP00000056166
Ensembl peptide - ENSGALP00000044713
NCBI entrez gene - 425867     See in Manteia.
RefSeq - XM_015299728
RefSeq - XM_015299729
RefSeq - XM_015299730
swissprot - A0A1D5PTC3
swissprot - A0A1D5NWH3
swissprot - R4GKW3
Ensembl - ENSGALG00000026716
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 celf5aENSDARG00000071375Danio rerio
 celf5bENSDARG00000090727Danio rerio
 zgc:165603ENSDARG00000098702Danio rerio
 CELF5ENSG00000161082Homo sapiens
 Celf5ENSMUSG00000034818Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CELF3* / Q5SZQ8* / Q8CIN6* / CUGBP Elav-like family member 3* / Mus musculus CUGBP, Elav-like family member 3 (Celf3), transcript variant 8, mRNA.*ENSGALG0000002847853
CELF4 / CUGBP Elav-like family member 4 / Q7TSY6* / Q9BZC1*ENSGALG0000000241342
CELF6* / Q7TN33* / Q96J87* / AC009690.3* / CUGBP Elav-like family member 6*ENSGALG0000003131340
CELF2 / CUGBP Elav-like family member 2 / O95319* / Q9Z0H4*ENSGALG0000003459038
CELF1 / CUGBP Elav-like family member 1 / P28659* / Q92879*ENSGALG0000000809738
ENSGALG0000003893014


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr