ENSG00000161082


Homo sapiens

Features
Gene ID: ENSG00000161082
  
Biological name :CELF5
  
Synonyms : CELF5 / CUGBP Elav-like family member 5 / Q8N6W0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p13.3
Gene start: 3224703
Gene end: 3297076
  
Corresponding Affymetrix probe sets: 230497_at (Human Genome U133 Plus 2.0 Array)   231744_at (Human Genome U133 Plus 2.0 Array)   232416_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468503
Ensembl peptide - ENSP00000292672
Ensembl peptide - ENSP00000335182
Ensembl peptide - ENSP00000443498
NCBI entrez gene - 60680     See in Manteia.
OMIM - 612680
RefSeq - XM_017027111
RefSeq - XM_006722836
RefSeq - XM_006722837
RefSeq - XM_006722838
RefSeq - XM_011528173
RefSeq - XM_011528174
RefSeq - NM_001172673
RefSeq - NM_021938
RefSeq - XM_006722832
RefSeq - XM_006722833
RefSeq Peptide - NP_001166144
RefSeq Peptide - NP_068757
swissprot - K7ES14
swissprot - Q8N6W0
swissprot - B4DFI3
Ensembl - ENSG00000161082
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 celf5aENSDARG00000071375Danio rerio
 celf5bENSDARG00000090727Danio rerio
 zgc:165603ENSDARG00000098702Danio rerio
 CELF5ENSGALG00000026716Gallus gallus
 Celf5ENSMUSG00000034818Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CELF4 / Q9BZC1 / CUGBP Elav-like family member 4ENSG0000010148966
CELF6 / Q96J87 / CUGBP Elav-like family member 6ENSG0000014048864
AC009690.3ENSG0000027302564
CELF3 / Q5SZQ8 / CUGBP Elav-like family member 3ENSG0000015940964
CELF2 / O95319 / CUGBP Elav-like family member 2ENSG0000004874046
CELF1 / Q92879 / CUGBP Elav-like family member 1ENSG0000014918746


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034648  CELF-3/4/5/6, RNA recognition motif 1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IDA
 biological_processGO:0006397 mRNA processing IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0036002 pre-mRNA binding NAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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