ENSG00000159409


Homo sapiens

Features
Gene ID: ENSG00000159409
  
Biological name :CELF3
  
Synonyms : CELF3 / CUGBP Elav-like family member 3 / Q5SZQ8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q21.3
Gene start: 151702404
Gene end: 151716814
  
Corresponding Affymetrix probe sets: 206817_x_at (Human Genome U133 Plus 2.0 Array)   215045_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000290583
Ensembl peptide - ENSP00000290585
Ensembl peptide - ENSP00000402503
NCBI entrez gene - 11189     See in Manteia.
OMIM - 612678
RefSeq - NM_007185
RefSeq - XM_017000146
RefSeq - NM_001172648
RefSeq - NM_001172649
RefSeq - NM_001291106
RefSeq - NM_001291107
RefSeq - XM_006711139
RefSeq - XM_006711141
RefSeq - XM_011509111
RefSeq - XM_011509112
RefSeq - XM_011509114
RefSeq - XM_017000145
RefSeq Peptide - NP_001278035
RefSeq Peptide - NP_001166119
RefSeq Peptide - NP_001166120
RefSeq Peptide - NP_001278036
RefSeq Peptide - NP_009116
swissprot - H0Y623
swissprot - Q5SZQ8
Ensembl - ENSG00000159409
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 celf3aENSDARG00000034668Danio rerio
 celf3bENSDARG00000006983Danio rerio
 ENSGALG00000028478Gallus gallus
 Celf3ENSMUSG00000028137Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CELF6 / Q96J87 / CUGBP Elav-like family member 6ENSG0000014048868
AC009690.3ENSG0000027302568
CELF4 / Q9BZC1 / CUGBP Elav-like family member 4ENSG0000010148968
CELF5 / Q8N6W0 / CUGBP Elav-like family member 5ENSG0000016108266
CELF2 / O95319 / CUGBP Elav-like family member 2ENSG0000004874048
CELF1 / Q92879 / CUGBP Elav-like family member 1ENSG0000014918747


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034648  CELF-3/4/5/6, RNA recognition motif 1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IDA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0008380 RNA splicing IMP
 biological_processGO:0030317 flagellated sperm motility IEA
 biological_processGO:0030575 nuclear body organization IEA
 biological_processGO:0048026 positive regulation of mRNA splicing, via spliceosome IDA
 biological_processGO:0098781 ncRNA transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0036002 pre-mRNA binding NAS
 molecular_functionGO:0097322 7SK snRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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