ENSG00000140488


Homo sapiens

Features
Gene ID: ENSG00000140488
  
Biological name :CELF6
  
Synonyms : CELF6 / CUGBP Elav-like family member 6 / Q96J87
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q23
Gene start: 72284727
Gene end: 72320129
  
Corresponding Affymetrix probe sets: 227775_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000378677
Ensembl peptide - ENSP00000439956
Ensembl peptide - ENSP00000457863
Ensembl peptide - ENSP00000287202
Ensembl peptide - ENSP00000400439
NCBI entrez gene - 60677     See in Manteia.
OMIM - 612681
RefSeq - NM_001172685
RefSeq - NM_001172684
RefSeq - NM_052840
RefSeq Peptide - NP_001166156
RefSeq Peptide - NP_001166155
RefSeq Peptide - NP_443072
swissprot - Q96J87
swissprot - F6UBL3
Ensembl - ENSG00000140488
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CELF6ENSDARG00000101933Danio rerio
 ENSGALG00000031313Gallus gallus
 Celf6ENSMUSG00000032297Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AC009690.3ENSG00000273025100
CELF4 / Q9BZC1 / CUGBP Elav-like family member 4ENSG0000010148969
CELF3 / Q5SZQ8 / CUGBP Elav-like family member 3ENSG0000015940966
CELF5 / Q8N6W0 / CUGBP Elav-like family member 5ENSG0000016108264
CELF2 / O95319 / CUGBP Elav-like family member 2ENSG0000004874047
CELF1 / Q92879 / CUGBP Elav-like family member 1ENSG0000014918747


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034648  CELF-3/4/5/6, RNA recognition motif 1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IDA
 biological_processGO:0006397 mRNA processing IEA
 cellular_componentGO:0005634 nucleus NAS
 cellular_componentGO:0005737 cytoplasm NAS
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding NAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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