ENSGALG00000002486


Gallus gallus

Features
Gene ID: ENSGALG00000002486
  
Biological name :RNF123
  
Synonyms : ring finger protein 123 / RNF123
  
Possible biological names infered from orthology : Q5XPI3 / Q5XPI4
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 2318860
Gene end: 2360133
  
Corresponding Affymetrix probe sets: Gga.14378.1.S1_at (Chicken Array)   Gga.7772.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003908
NCBI entrez gene - 415923     See in Manteia.
RefSeq - NM_001293314
RefSeq Peptide - NP_001280243
swissprot - E1C5W8
Ensembl - ENSGALG00000002486
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf123ENSDARG00000031269Danio rerio
 Q5XPI4ENSG00000164068Homo sapiens
 Q5XPI3ENSMUSG00000041528Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RSPRY1 / ring finger and SPRY domain containing 1 / Q8BVR6* / Q96DX4*ENSGALG000000013503


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000006824 USP19 / ubiquitin specific peptidase 19 / O94966* / Q3UJD6*  / complex






 

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contact: otassy@igbmc.fr