ENSMUSG00000041528


Mus musculus

Features
Gene ID: ENSMUSG00000041528
  
Biological name :Rnf123
  
Synonyms : Q5XPI3 / ring finger protein 123 / Rnf123
  
Possible biological names infered from orthology : Q5XPI4
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: F1
Gene start: 108051534
Gene end: 108083346
  
Corresponding Affymetrix probe sets: 10596815 (MoGene1.0st)   1434611_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000125745
Ensembl peptide - ENSMUSP00000125695
Ensembl peptide - ENSMUSP00000134087
Ensembl peptide - ENSMUSP00000136953
Ensembl peptide - ENSMUSP00000040803
Ensembl peptide - ENSMUSP00000123933
Ensembl peptide - ENSMUSP00000124548
Ensembl peptide - ENSMUSP00000124824
Ensembl peptide - ENSMUSP00000124986
Ensembl peptide - ENSMUSP00000125213
Ensembl peptide - ENSMUSP00000125495
NCBI entrez gene - 84585     See in Manteia.
MGI - MGI:2148796
RefSeq - XM_017313707
RefSeq - NM_001311152
RefSeq - NM_032543
RefSeq - XM_006511877
RefSeq - XM_006511878
RefSeq - XM_006511879
RefSeq - XM_006511881
RefSeq - XM_006511883
RefSeq Peptide - NP_001298081
RefSeq Peptide - NP_115932
swissprot - Q05CH9
swissprot - E0CYS5
swissprot - F6U715
swissprot - F7B5Z3
swissprot - G3UYH5
swissprot - E0CXL3
swissprot - Q5XPI3
swissprot - E0CX26
Ensembl - ENSMUSG00000041528
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf123ENSDARG00000031269Danio rerio
 RNF123ENSGALG00000002486Gallus gallus
 Q5XPI4ENSG00000164068Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BVR6 / Rspry1 / ring finger and SPRY domain containing 1 / Q96DX4*ENSMUSG000000500796


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR011989  Armadillo-like helical
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR035773  Ring finger protein 123, SPRY domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0031965 nuclear membrane ISO
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000006676 Usp19 / Q3UJD6 / ubiquitin specific peptidase 19 / O94966*  / complex






 

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contact: otassy@igbmc.fr