ENSGALG00000002709


Gallus gallus

Features
Gene ID: ENSGALG00000002709
  
Biological name :MYO1C
  
Synonyms : MYO1C / unconventional myosin-Ic
  
Possible biological names infered from orthology : myosin IC / O00159 / Q9WTI7
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 5189500
Gene end: 5240189
  
Corresponding Affymetrix probe sets: Gga.12373.1.S1_at (Chicken Array)   GgaAffx.11931.1.S1_s_at (Chicken Array)   GgaAffx.1769.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044876
Ensembl peptide - ENSGALP00000053701
Ensembl peptide - ENSGALP00000004265
NCBI entrez gene - 417555     See in Manteia.
RefSeq - XM_015295745
RefSeq - XM_015295741
RefSeq - XM_015295742
RefSeq - XM_015295743
RefSeq - XM_015295744
RefSeq - NM_001006220
RefSeq Peptide - NP_001006220
swissprot - A0A1D5PLI4
swissprot - F1NG39
swissprot - A0A1D5NWY3
Ensembl - ENSGALG00000002709
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A5PF48ENSDARG00000020924Danio rerio
 myo1cbENSDARG00000061579Danio rerio
 MYO1CENSG00000197879Homo sapiens
 Myo1cENSMUSG00000017774Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MYO1H / myosin IH / Q8N1T3* / Q9D6A1* / Unconventional myosin-Ih *ENSGALG0000000512263
MYO1B / myosin IB / O43795* / P46735*ENSGALG0000000771244
MYO1A / unconventional myosin-Ia / O88329* / Q9UBC5* / myosin IA*ENSGALG0000003259841
MYO1G / unconventional myosin-Ig / B0I1T2* / Q5SUA5* / myosin IG*ENSGALG0000000564439
MYO1D / myosin ID / O94832* / Q5SYD0* / Unconventional myosin-Id *ENSGALG0000000067439
MYO1E / myosin IE / E9Q634* / Q12965* / Unconventional myosin-Ie *ENSGALG0000000415036
MYO1F / unconventional myosin-If / O00160* / myosin IF*ENSGALG0000000157136
MYO15A / myosin XVA / Myo15* / Q9QZZ4* / Q9UKN7* / Unconventional myosin-XV *ENSGALG0000000497828
MYO15B* / myosin XVB*ENSGALG000000385744


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001609  Myosin head, motor domain
 IPR010926  Class I myosin tail homology domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006605 protein targeting IEA
 biological_processGO:0006612 protein targeting to membrane IEA
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0030050 vesicle transport along actin filament IEA
 biological_processGO:0030335 positive regulation of cell migration IEA
 biological_processGO:0038089 positive regulation of cell migration by vascular endothelial growth factor signaling pathway IEA
 biological_processGO:0071346 cellular response to interferon-gamma IEA
 biological_processGO:0090314 positive regulation of protein targeting to membrane IEA
 biological_processGO:1900078 positive regulation of cellular response to insulin stimulus IEA
 biological_processGO:1900748 positive regulation of vascular endothelial growth factor signaling pathway IEA
 biological_processGO:2000810 regulation of bicellular tight junction assembly IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005902 microvillus IEA
 cellular_componentGO:0005903 brush border IEA
 cellular_componentGO:0009925 basal plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016328 lateral plasma membrane IEA
 cellular_componentGO:0016459 myosin complex IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031941 filamentous actin IEA
 cellular_componentGO:0032420 stereocilium IEA
 cellular_componentGO:0045121 membrane raft IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0017160 Ral GTPase binding IEA


Pathways (from Reactome)
Pathway description
Regulation of actin dynamics for phagocytic cup formation
B-WICH complex positively regulates rRNA expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000009621 ACTB / P60706 / Actin, cytoplasmic 1 Actin, cytoplasmic 1, N-terminally processed / P60709* / P60710* / actin beta*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr