ENSGALG00000002827


Gallus gallus

Features
Gene ID: ENSGALG00000002827
  
Biological name :GPS1
  
Synonyms : COP9 signalosome complex subunit 1 / GPS1
  
Possible biological names infered from orthology : G protein pathway suppressor 1 / Q13098
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 5022782
Gene end: 5032195
  
Corresponding Affymetrix probe sets: Gga.5553.1.S1_at (Chicken Array)   Gga.5553.2.S1_at (Chicken Array)   Gga.5553.2.S1_s_at (Chicken Array)   GgaAffx.11740.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004453
Ensembl peptide - ENSGALP00000046845
Ensembl peptide - ENSGALP00000046764
NCBI entrez gene - 417382     See in Manteia.
RefSeq - NM_001006206
RefSeq - XM_015295166
RefSeq Peptide - NP_001006206
swissprot - A0A1D5P2F0
swissprot - A0A1D5P269
swissprot - F1NB10
Ensembl - ENSGALG00000002827
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gps1ENSDARG00000040650Danio rerio
 GPS1ENSG00000169727Homo sapiens
 Gps1ENSMUSG00000025156Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PSMD6 / proteasome 26S subunit, non-ATPase 6 / Q15008* / Q99JI4* / 26S proteasome non-ATPase regulatory subunit 6 *ENSGALG0000000731518


Protein motifs (from Interpro)
Interpro ID Name
 IPR000717  Proteasome component (PCI) domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR011991  ArsR-like helix-turn-helix domain
 IPR019585  26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1
 IPR033008  COP9 signalosome complex subunit 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000338 protein deneddylation IEA
 cellular_componentGO:0008180 COP9 signalosome IEA


Pathways (from Reactome)
Pathway description
DNA Damage Recognition in GG-NER
Formation of TC-NER Pre-Incision Complex
Cargo recognition for clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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