ENSGALG00000003096


Gallus gallus

Features
Gene ID: ENSGALG00000003096
  
Biological name :CBFA2T2
  
Synonyms : CBFA2T2 / protein CBFA2T2
  
Possible biological names infered from orthology : CBFA2/RUNX1 translocation partner 2 / core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) / O43439 / O70374
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 2284256
Gene end: 2334193
  
Corresponding Affymetrix probe sets: GgaAffx.1950.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004884
NCBI entrez gene - 419155     See in Manteia.
RefSeq - NM_001011689
RefSeq Peptide - NP_001011689
swissprot - F1NBC4
Ensembl - ENSGALG00000003096
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cbfa2t2ENSDARG00000074337Danio rerio
 O43439ENSG00000078699Homo sapiens
 O70374ENSMUSG00000038533Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RUNX1T1 / protein CBFA2T1 isoform 2 / Q61909* / Q06455* / RUNX1 translocation partner 1* / runt-related transcription factor 1; translocated to, 1 (cyclin D-related)*ENSGALG0000003309164
CBFA2T3 / protein CBFA2T3 / O54972* / O75081* / CBFA2/RUNX1 translocation partner 3*ENSGALG0000003241059
DEAF1 / DEAF1, transcription factor / O75398* / Q9Z1T5* / Deformed epidermal autoregulatory factor 1 homolog *ENSGALG0000003422514


Protein motifs (from Interpro)
Interpro ID Name
 IPR002893  Zinc finger, MYND-type
 IPR003894  TAFH/NHR1
 IPR013289  CBFA2T family
 IPR013291  Myeloid transforming gene-related protein-1 (MTGR1)
 IPR014896  NHR2-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003714 transcription corepressor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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