ENSGALG00000033091


Gallus gallus

Features
Gene ID: ENSGALG00000033091
  
Biological name :RUNX1T1
  
Synonyms : protein CBFA2T1 isoform 2 / RUNX1T1
  
Possible biological names infered from orthology : Q06455 / Q61909 / runt-related transcription factor 1; translocated to, 1 (cyclin D-related) / RUNX1 translocation partner 1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 125596521
Gene end: 125702636
  
Corresponding Affymetrix probe sets: Gga.13441.1.S1_x_at (Chicken Array)   Gga.13799.1.A1_at (Chicken Array)   Gga.13799.1.S1_at (Chicken Array)   Gga.18130.1.S1_at (Chicken Array)   Gga.269.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045855
Ensembl peptide - ENSGALP00000050027
Ensembl peptide - ENSGALP00000048883
Ensembl peptide - ENSGALP00000046645
NCBI entrez gene - 395503     See in Manteia.
RefSeq - XM_015282777
RefSeq - XM_015282770
RefSeq - XM_015282771
RefSeq - XM_015282772
RefSeq - XM_015282773
RefSeq - XM_015282774
RefSeq - XM_015282776
RefSeq - NM_001303464
RefSeq - NM_204744
RefSeq Peptide - NP_990075
RefSeq Peptide - NP_001290393
swissprot - A0A1D5PBA3
swissprot - A0A1D5P838
swissprot - A0A1D5P1V3
swissprot - A0A1D5NZN7
Ensembl - ENSGALG00000033091
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 runx1t1ENSDARG00000003680Danio rerio
 Q06455ENSG00000079102Homo sapiens
 Q61909ENSMUSG00000006586Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CBFA2T3 / protein CBFA2T3 / O54972* / O75081* / CBFA2/RUNX1 translocation partner 3*ENSGALG0000003241072
CBFA2T2 / protein CBFA2T2 / O43439* / O70374* / CBFA2/RUNX1 translocation partner 2* / core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)*ENSGALG0000000309662
DEAF1 / DEAF1, transcription factor / O75398* / Q9Z1T5* / Deformed epidermal autoregulatory factor 1 homolog *ENSGALG0000003422515


Protein motifs (from Interpro)
Interpro ID Name
 IPR002893  Zinc finger, MYND-type
 IPR003894  TAFH/NHR1
 IPR013289  CBFA2T family
 IPR013290  Protein CBFA2T1
 IPR014896  NHR2-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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