ENSGALG00000003169


Gallus gallus

Features
Gene ID: ENSGALG00000003169
  
Biological name :CBFB
  
Synonyms : CBFB / core-binding factor subunit beta
  
Possible biological names infered from orthology : core-binding factor beta subunit / Q08024 / Q13951
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 2404978
Gene end: 2447419
  
Corresponding Affymetrix probe sets: Gga.17908.1.S1_at (Chicken Array)   Gga.17908.1.S1_s_at (Chicken Array)   Gga.9351.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000061217
Ensembl peptide - ENSGALP00000061601
Ensembl peptide - ENSGALP00000005013
NCBI entrez gene - 395257     See in Manteia.
RefSeq - NM_204570
RefSeq Peptide - NP_989901
swissprot - A0A1L1RQZ4
swissprot - F1NQP4
swissprot - Q5ZM50
Ensembl - ENSGALG00000003169
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cbfbENSDARG00000040917Danio rerio
 CBFBENSG00000067955Homo sapiens
 CbfbENSMUSG00000031885Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003417  Core-binding factor, beta subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0001503 ossification IEA
 biological_processGO:0001649 osteoblast differentiation IEA
 biological_processGO:0030098 lymphocyte differentiation IEA
 biological_processGO:0030099 myeloid cell differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048469 cell maturation IEA
 biological_processGO:0060216 definitive hemopoiesis IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA


Pathways (from Reactome)
Pathway description
Transcriptional regulation by RUNX2
RUNX1 regulates estrogen receptor mediated transcription
Regulation of RUNX1 Expression and Activity
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
RUNX1 regulates transcription of genes involved in differentiation of HSCs
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
RUNX1 regulates transcription of genes involved in BCR signaling
RUNX1 regulates transcription of genes involved in differentiation of myeloid cells
RUNX1 regulates transcription of genes involved in interleukin signaling
RUNX2 regulates bone development
Regulation of RUNX3 expression and activity
RUNX3 regulates p14-ARF
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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