ENSGALG00000003426


Gallus gallus

Features
Gene ID: ENSGALG00000003426
  
Biological name :RHBDL3
  
Synonyms : RHBDL3 / rhomboid like 3
  
Possible biological names infered from orthology : P58872 / P58873 / Rhomboid-related protein 3
  
Species: Gallus gallus
  
Chr. number: 18
Strand: 1
Band:
Gene start: 6752226
Gene end: 6795369
  
Corresponding Affymetrix probe sets: GgaAffx.2126.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005409
NCBI entrez gene - 417411     See in Manteia.
RefSeq - XM_015279916
RefSeq - XM_015279919
RefSeq - XM_015279917
RefSeq - XM_015279918
swissprot - F1NQJ7
Ensembl - ENSGALG00000003426
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rhbdl3ENSDARG00000105190Danio rerio
 P58872ENSG00000141314Homo sapiens
 P58873ENSMUSG00000017692Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RHBDL1 / rhomboid like 1 / O75783* / Q8VC82* / Rhomboid-related protein 1 *ENSGALG0000002834552


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR002610  Peptidase S54, rhomboid
 IPR011992  EF-hand domain pair
 IPR017213  Peptidase S54, rhomboid, metazoan
 IPR018247  EF-Hand 1, calcium-binding site
 IPR022764  Peptidase S54, rhomboid domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0016485 protein processing IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0004252 serine-type endopeptidase activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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