ENSGALG00000003563


Gallus gallus

Features
Gene ID: ENSGALG00000003563
  
Biological name :YARS
  
Synonyms : tyrosine--tRNA ligase, cytoplasmic / YARS
  
Possible biological names infered from orthology : P54577 / tyrosyl-tRNA synthetase
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 5279493
Gene end: 5284301
  
Corresponding Affymetrix probe sets: Gga.4637.1.S1_s_at (Chicken Array)   Gga.4637.2.A1_at (Chicken Array)   Gga.4637.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005633
Ensembl peptide - ENSGALP00000051774
Ensembl peptide - ENSGALP00000050449
NCBI entrez gene - 419666     See in Manteia.
RefSeq - NM_001006314
RefSeq - XM_015297670
RefSeq Peptide - NP_001006314
swissprot - A0A1D5PG54
swissprot - A0A1D5PCG1
swissprot - F1NJU7
Ensembl - ENSGALG00000003563
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 yarsENSDARG00000035913Danio rerio
 YARSENSG00000134684Homo sapiens
 YarsENSMUSG00000028811Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002305  Aminoacyl-tRNA synthetase, class Ic
 IPR002307  Tyrosine-tRNA ligase
 IPR002547  tRNA-binding domain
 IPR012340  Nucleic acid-binding, OB-fold
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006437 tyrosyl-tRNA aminoacylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004831 tyrosine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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