ENSGALG00000003757


Gallus gallus

Features
Gene ID: ENSGALG00000003757
  
Biological name :POMT1
  
Synonyms : POMT1 / protein O-mannosyl-transferase 1
  
Possible biological names infered from orthology : protein O-mannosyltransferase 1 / Q8R2R1 / Q9Y6A1
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 6695528
Gene end: 6708396
  
Corresponding Affymetrix probe sets: GgaAffx.12358.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005954
NCBI entrez gene - 417175     See in Manteia.
RefSeq - XM_015279452
RefSeq - NM_001030685
RefSeq - XM_015279450
RefSeq - XM_015279451
RefSeq - XM_015279447
RefSeq - XM_015279448
RefSeq - XM_015279449
RefSeq Peptide - NP_001025856
swissprot - F1NMM0
Ensembl - ENSGALG00000003757
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pomt1ENSDARG00000067670Danio rerio
 POMT1ENSG00000130714Homo sapiens
 Pomt1ENSMUSG00000039254Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
POMT2* / Q8BGQ4* / Q9UKY4* / protein O-mannosyltransferase 2* / Protein O-mannosyl-transferase 2 *ENSGALG0000004196230


Protein motifs (from Interpro)
Interpro ID Name
 IPR003342  Glycosyl transferase family 39/83
 IPR016093  MIR motif
 IPR027005  Glycosyltransferase 39-like
 IPR032421  Protein O-mannosyl-transferase, C-terminal four TM domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006493 protein O-linked glycosylation IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0035269 protein O-linked mannosylation IEA
 biological_processGO:0071712 ER-associated misfolded protein catabolic process IBA
 biological_processGO:0097502 mannosylation IEA
 cellular_componentGO:0001669 acrosomal vesicle IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum IEA
 molecular_functionGO:0000030 mannosyltransferase activity IEA
 molecular_functionGO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA


Pathways (from Reactome)
Pathway description
O-linked glycosylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr