ENSGALG00000003812


Gallus gallus

Features
Gene ID: ENSGALG00000003812
  
Biological name :UBE2F
  
Synonyms : NEDD8-conjugating enzyme UBE2F / Q5ZKX6 / UBE2F
  
Possible biological names infered from orthology : Q969M7 / Q9CY34 / UBE2F-SCLY / UBE2F-SCLY readthrough (NMD candidate) / ubiquitin conjugating enzyme E2 F (putative)
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 4583062
Gene end: 4646141
  
Corresponding Affymetrix probe sets: Gga.8400.1.S1_at (Chicken Array)   Gga.8400.2.S1_at (Chicken Array)   Gga.8400.3.S1_at (Chicken Array)   GgaAffx.12061.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045869
Ensembl peptide - ENSGALP00000064619
Ensembl peptide - ENSGALP00000053500
Ensembl peptide - ENSGALP00000052225
Ensembl peptide - ENSGALP00000006035
NCBI entrez gene - 424015     See in Manteia.
RefSeq - XM_015289164
RefSeq - NM_001006512
RefSeq Peptide - NP_001006512
swissprot - A0A1D5NZQ1
swissprot - G1K2Z4
swissprot - A0A1L1S0G1
swissprot - Q5ZKX6
swissprot - A0A1D5PHE7
Ensembl - ENSGALG00000003812
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ube2fENSDARG00000025754Danio rerio
 UBE2FENSG00000184182Homo sapiens
 UBE2F-SCLYENSG00000258984Homo sapiens
 Ube2fENSMUSG00000034343Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000608  Ubiquitin-conjugating enzyme E2
 IPR016135  Ubiquitin-conjugating enzyme/RWD-like
 IPR023313  Ubiquitin-conjugating enzyme, active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0045116 protein neddylation IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0019788 NEDD8 transferase activity IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IBA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000038957 NAE1 / NEDD8-activating enzyme E1 regulatory subunit / Q13564* / Q8VBW6* / NEDD8 activating enzyme E1 subunit 1*  / reaction / complex






 

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contact: otassy@igbmc.fr