ENSGALG00000003947


Gallus gallus

Features
Gene ID: ENSGALG00000003947
  
Biological name :HNRNPH3
  
Synonyms : heterogeneous nuclear ribonucleoprotein H3 / HNRNPH3
  
Possible biological names infered from orthology : Mus musculus heteroous nuclear ribonucleoprotein H3 (Hnrnph3), transcript variant 3, mRNA. / P31942
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 10560510
Gene end: 10567007
  
Corresponding Affymetrix probe sets: Gga.13466.1.S1_at (Chicken Array)   GgaAffx.26068.1.S1_at (Chicken Array)   GgaAffx.26068.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000063967
Ensembl peptide - ENSGALP00000006284
Ensembl peptide - ENSGALP00000048024
NCBI entrez gene - 423686     See in Manteia.
RefSeq - XM_015278683
RefSeq - NM_001012592
RefSeq - XM_015278681
RefSeq - XM_015278682
RefSeq Peptide - NP_001012610
swissprot - A0A1L1RYN8
swissprot - Q5F3D2
Ensembl - ENSGALG00000003947
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnph3ENSDARG00000039466Danio rerio
 P31942ENSG00000096746Homo sapiens
 Hnrnph3ENSMUSG00000020069Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HNRNPH2 / heterogeneous nuclear ribonucleoprotein H / Q9Z2X1* / HNRNPF* / O35737* / P31943* / P52597* / P55795* / P70333* / HNRNPH1* / heterogeneous nuclear ribonucleoprotein F* / heteroge...ENSGALG0000003112065
ESRP2 / Q5ZLR4 / Epithelial splicing regulatory protein 2 / Q8K0G8* / Q9H6T0*ENSGALG0000000337421
RBM12 / RNA binding motif protein 12 / Q8R4X3* / Q9NTZ6* / RNA-binding protein 12 *ENSGALG0000003025320
ESRP1 / epithelial splicing regulatory protein 1 / Q3US41* / Q6NXG1* / Mus musculus epithelial splicing regulatory protein 1 (Esrp1), transcript variant 3, mRNA.*ENSGALG0000003107620
RBM12B / RNA binding motif protein 12B / Q66JV4* / Q80YR9* / Q8IXT5* / Rbm12b1* / Rbm12b2* / RNA-binding protein 12B-A * / Mus musculus RNA binding motif protein 12 B2 (Rbm12b2), transcript...ENSGALG0000003512919
GRSF1* / Q12849* / Q8C5Q4* / G-rich sequence factor 1 * / G-rich RNA sequence binding factor 1*ENSGALG0000003116011
GRSF1* / Q12849* / Q8C5Q4* / G-rich sequence factor 1 * / G-rich RNA sequence binding factor 1*ENSGALG000000402322


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030855 epithelial cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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