ENSGALG00000035129


Gallus gallus

Features
Gene ID: ENSGALG00000035129
  
Biological name :RBM12B
  
Synonyms : RBM12B / RNA binding motif protein 12B
  
Possible biological names infered from orthology : Mus musculus RNA binding motif protein 12 B2 (Rbm12b2), transcript variant 3, mRNA. / Q66JV4 / Q80YR9 / Q8IXT5 / Rbm12b1 / Rbm12b2 / RNA-binding protein 12B-A
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 126406456
Gene end: 126412952
  
Corresponding Affymetrix probe sets: GgaAffx.10151.1.A1_at (Chicken Array)   GgaAffx.10151.1.S1_s_at (Chicken Array)   GgaAffx.13088.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046557
NCBI entrez gene - 420223     See in Manteia.
RefSeq - NM_001030944
RefSeq Peptide - NP_001026115
swissprot - Q5ZHZ9
Ensembl - ENSGALG00000035129
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm12bENSDARG00000079717Danio rerio
 Q8IXT5ENSG00000183808Homo sapiens
 Q66JV4ENSMUSG00000052137Mus musculus
 Q80YR9ENSMUSG00000046667Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBM12 / RNA binding motif protein 12 / Q8R4X3* / Q9NTZ6* / RNA-binding protein 12 *ENSGALG0000003025339
HNRNPH2 / heterogeneous nuclear ribonucleoprotein H / Q9Z2X1* / HNRNPF* / O35737* / P31943* / P52597* / P55795* / P70333* / HNRNPH1* / heterogeneous nuclear ribonucleoprotein F* / heteroge...ENSGALG0000003112014
ESRP2 / Q5ZLR4 / Epithelial splicing regulatory protein 2 / Q8K0G8* / Q9H6T0*ENSGALG0000000337413
ESRP1 / epithelial splicing regulatory protein 1 / Q3US41* / Q6NXG1* / Mus musculus epithelial splicing regulatory protein 1 (Esrp1), transcript variant 3, mRNA.*ENSGALG0000003107611
HNRNPH3 / heterogeneous nuclear ribonucleoprotein H3 / P31942* / Mus musculus heteroous nuclear ribonucleoprotein H3 (Hnrnph3), transcript variant 3, mRNA.*ENSGALG000000039479
GRSF1* / Q12849* / Q8C5Q4* / G-rich sequence factor 1 * / G-rich RNA sequence binding factor 1*ENSGALG000000311604
GRSF1* / Q12849* / Q8C5Q4* / G-rich sequence factor 1 * / G-rich RNA sequence binding factor 1*ENSGALG000000402322


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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