ENSMUSG00000046667


Mus musculus

Features
Gene ID: ENSMUSG00000046667
  
Biological name :Rbm12b1
  
Synonyms : Q80YR9 / Rbm12b1 / RNA-binding protein 12B-A
  
Possible biological names infered from orthology : Q8IXT5 / RBM12B / RNA binding motif protein 12B
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: A1
Gene start: 12140264
Gene end: 12146731
  
Corresponding Affymetrix probe sets: 10503363 (MoGene1.0st)   1435158_at (Mouse Genome 430 2.0 Array)   1453979_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000053555
Ensembl peptide - ENSMUSP00000064195
NCBI entrez gene - 72397     See in Manteia.
MGI - MGI:1919647
RefSeq - XM_006538274
RefSeq - NM_028226
RefSeq - XM_006538272
RefSeq - XM_006538273
RefSeq - XM_006538271
RefSeq Peptide - NP_082502
swissprot - Q80YR9
Ensembl - ENSMUSG00000046667
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm12bENSDARG00000079717Danio rerio
 RBM12BENSGALG00000035129Gallus gallus
 Q8IXT5ENSG00000183808Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q66JV4 / Rbm12b2 / Mus musculus RNA binding motif protein 12 B2 (Rbm12b2), transcript variant 3, mRNA. / Q8IXT5* / RBM12B* / RNA binding motif protein 12B*ENSMUSG0000005213796
Rbm12 / Q8R4X3 / RNA-binding protein 12 / Q9NTZ6* / RNA binding motif protein 12*ENSMUSG0000008982432
P70333 / Hnrnph2 / Heteroous nuclear ribonucleoprotein H2 Heteroous nuclear ribonucleoprotein H2, N-terminally processed / P55795* / heterogeneous nuclear ribonucleoprotein H2*ENSMUSG0000004542713
O35737 / Hnrnph1 / Mus musculus heteroous nuclear ribonucleoprotein H1 (Hnrnph1), transcript variant 1, mRNA. / P31943* / heterogeneous nuclear ribonucleoprotein H1*ENSMUSG0000000785013
Esrp1 / Q3US41 / Mus musculus epithelial splicing regulatory protein 1 (Esrp1), transcript variant 3, mRNA. / Q6NXG1* / epithelial splicing regulatory protein 1*ENSMUSG0000004072812
Esrp2 / Q8K0G8 / Epithelial splicing regulatory protein 2 / Q9H6T0*ENSMUSG0000008412812
Hnrnpf / Q9Z2X1 / Heteroous nuclear ribonucleoprotein F Heteroous nuclear ribonucleoprotein F, N-terminally processed / P52597* / heterogeneous nuclear ribonucleoprotein F*ENSMUSG0000004207911
Hnrnph3 / Mus musculus heteroous nuclear ribonucleoprotein H3 (Hnrnph3), transcript variant 3, mRNA. / P31942* / heterogeneous nuclear ribonucleoprotein H3*ENSMUSG000000200699
Grsf1 / Q8C5Q4 / G-rich sequence factor 1 / Q12849* / G-rich RNA sequence binding factor 1*ENSMUSG000000442219
Gm28036ENSMUSG000000989504


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034588  RBM12B, RNA recognition motif 2
 IPR034858  RBM12B, RNA recognition motif 3
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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