ENSMUSG00000089824


Mus musculus

Features
Gene ID: ENSMUSG00000089824
  
Biological name :Rbm12
  
Synonyms : Q8R4X3 / Rbm12 / RNA-binding protein 12
  
Possible biological names infered from orthology : Q9NTZ6 / RNA binding motif protein 12
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: H1
Gene start: 156091958
Gene end: 156111978
  
Corresponding Affymetrix probe sets: 1416928_at (Mouse Genome 430 2.0 Array)   1416929_at (Mouse Genome 430 2.0 Array)   1456964_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000105233
Ensembl peptide - ENSMUSP00000120731
Ensembl peptide - ENSMUSP00000119519
Ensembl peptide - ENSMUSP00000118067
Ensembl peptide - ENSMUSP00000050461
NCBI entrez gene - 75710     See in Manteia.
MGI - MGI:1922960
RefSeq - NM_170598
RefSeq - NM_029397
RefSeq Peptide - NP_083673
RefSeq Peptide - NP_733486
swissprot - Q8R4X3
swissprot - B7ZCQ0
swissprot - B7ZCP9
swissprot - B7ZCQ1
Ensembl - ENSMUSG00000089824
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm12ENSDARG00000100636Danio rerio
 RBM12ENSGALG00000030253Gallus gallus
 RBM12ENSG00000244462Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q66JV4 / Rbm12b2 / Mus musculus RNA binding motif protein 12 B2 (Rbm12b2), transcript variant 3, mRNA. / Q8IXT5* / RBM12B* / RNA binding motif protein 12B*ENSMUSG0000005213727
Q80YR9 / Rbm12b1 / RNA-binding protein 12B-A / RBM12B* / Q8IXT5* / RNA binding motif protein 12B*ENSMUSG0000004666727
P70333 / Hnrnph2 / Heteroous nuclear ribonucleoprotein H2 Heteroous nuclear ribonucleoprotein H2, N-terminally processed / P55795* / heterogeneous nuclear ribonucleoprotein H2*ENSMUSG0000004542710
O35737 / Hnrnph1 / Mus musculus heteroous nuclear ribonucleoprotein H1 (Hnrnph1), transcript variant 1, mRNA. / P31943* / heterogeneous nuclear ribonucleoprotein H1*ENSMUSG0000000785010
Hnrnpf / Q9Z2X1 / Heteroous nuclear ribonucleoprotein F Heteroous nuclear ribonucleoprotein F, N-terminally processed / P52597* / heterogeneous nuclear ribonucleoprotein F*ENSMUSG000000420799
Esrp2 / Q8K0G8 / Epithelial splicing regulatory protein 2 / Q9H6T0*ENSMUSG000000841289
Esrp1 / Q3US41 / Mus musculus epithelial splicing regulatory protein 1 (Esrp1), transcript variant 3, mRNA. / Q6NXG1* / epithelial splicing regulatory protein 1*ENSMUSG000000407289
Grsf1 / Q8C5Q4 / G-rich sequence factor 1 / Q12849* / G-rich RNA sequence binding factor 1*ENSMUSG000000442217
Hnrnph3 / Mus musculus heteroous nuclear ribonucleoprotein H3 (Hnrnph3), transcript variant 3, mRNA. / P31942* / heterogeneous nuclear ribonucleoprotein H3*ENSMUSG000000200697
Gm28036ENSMUSG000000989504


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034591  RBM12, RNA recognition motif 1
 IPR034594  RBM12, RNA recognition motif 2
 IPR034854  RBM12, RNA recognition motif 5
 IPR034855  RBM12, RNA recognition motif 3
 IPR034856  RBM12, RNA recognition motif 4
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000929 open neural tube "incomplete invagination and fusion of the neuroepithelial layer in early development" [MGI:CLS, J:53370, J:62571]
Show

Allelic Composition: Inpp5em1Tc/Inpp5em1Tc
Genetic Background: involves: C57BL/6J * FVB/N

 MP:0003632 abnormal nervous system morphology 
Show

Allelic Composition: Inpp5em1Tc/Inpp5em1Tc
Genetic Background: involves: C57BL/6J * FVB/N

 MP:0003984 embryonic growth retardation "slow or limited development before birth" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Inpp5em1Tc/Inpp5em1Tc
Genetic Background: involves: C57BL/6J * FVB/N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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