Manteia

ENSMUSG00000007850

Mus musculus

Features

Gene ID:	ENSMUSG00000007850

Biological name :	Hnrnph1

Synonyms :	Hnrnph1 / Mus musculus heteroous nuclear ribonucleoprotein H1 (Hnrnph1), transcript variant 1, mRNA. / O35737

Possible biological names infered from orthology :	heterogeneous nuclear ribonucleoprotein H1 / P31943

Species:	Mus musculus

Chr. number:	11
Strand:	1
Band:	B1.3
Gene start:	50376990
Gene end:	50386528

Corresponding Affymetrix probe sets:	10375735 (MoGene1.0st) 1415872_at (Mouse Genome 430 2.0 Array) 1437267_x_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000070503 Ensembl peptide - ENSMUSP00000076989 Ensembl peptide - ENSMUSP00000104770 NCBI entrez gene - 59013 See in Manteia. MGI - MGI:1891925 RefSeq - XM_017314697 RefSeq - NM_001347487 RefSeq - NM_021510 RefSeq - XM_017314692 RefSeq - XM_017314693 RefSeq - XM_017314694 RefSeq - XM_017314695 RefSeq - XM_017314696 RefSeq - XM_006533875 RefSeq - XM_006533876 RefSeq - XM_006533877 RefSeq - XM_006533878 RefSeq - XM_006533879 RefSeq - XM_006533880 RefSeq - XM_006533881 RefSeq - XM_006533883 RefSeq - XM_006533884 RefSeq - XM_017314690 RefSeq - XM_017314691 RefSeq Peptide - NP_067485 RefSeq Peptide - NP_001334416 swissprot - O35737 swissprot - Q811L7 swissprot - Q8C2Q7 Ensembl - ENSMUSG00000007850

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
P70333 / Hnrnph2 / Heteroous nuclear ribonucleoprotein H2 Heteroous nuclear ribonucleoprotein H2, N-terminally processed / P55795* / heterogeneous nuclear ribonucleoprotein H2*	ENSMUSG00000045427	89
Hnrnpf / Q9Z2X1 / Heteroous nuclear ribonucleoprotein F Heteroous nuclear ribonucleoprotein F, N-terminally processed / P52597* / heterogeneous nuclear ribonucleoprotein F*	ENSMUSG00000042079	68
Hnrnph3 / Mus musculus heteroous nuclear ribonucleoprotein H3 (Hnrnph3), transcript variant 3, mRNA. / P31942* / heterogeneous nuclear ribonucleoprotein H3*	ENSMUSG00000020069	48
Grsf1 / Q8C5Q4 / G-rich sequence factor 1 / Q12849* / G-rich RNA sequence binding factor 1*	ENSMUSG00000044221	33
Esrp1 / Q3US41 / Mus musculus epithelial splicing regulatory protein 1 (Esrp1), transcript variant 3, mRNA. / Q6NXG1* / epithelial splicing regulatory protein 1*	ENSMUSG00000040728	28
Esrp2 / Q8K0G8 / Epithelial splicing regulatory protein 2 / Q9H6T0*	ENSMUSG00000084128	27
Q66JV4 / Rbm12b2 / Mus musculus RNA binding motif protein 12 B2 (Rbm12b2), transcript variant 3, mRNA. / Q8IXT5* / RBM12B* / RNA binding motif protein 12B*	ENSMUSG00000052137	23
Q80YR9 / Rbm12b1 / RNA-binding protein 12B-A / RBM12B* / Q8IXT5* / RNA binding motif protein 12B*	ENSMUSG00000046667	22
Rbm12 / Q8R4X3 / RNA-binding protein 12 / Q9NTZ6* / RNA binding motif protein 12*	ENSMUSG00000089824	21
Gm28036	ENSMUSG00000098950	3

Protein motifs (from Interpro)

Interpro ID	Name
IPR000504	RNA recognition motif domain
IPR012996	Zinc finger, CHHC-type
IPR035979	RNA-binding domain superfamily

Gene Ontology (GO)

Pathways (from Reactome)

Pathway description

FGFR2 alternative splicing

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
MP:0011967	increased or absent threshold for auditory brainstem response	"increase in the value at which one or more sound frequencies or broadband clicks first elicits a recordable response generated by electrical activity of neurons in the ascending auditory system, or complete lack of a recordable response at any frequency or broadband click" [MGI:csmith]	Show Allelic Composition: Grin2b^{tm1e.1(KOMP)Wtsi}/Grin2b⁺ Genetic Background: C57BL/6N-Grin2b^{tm1e.1(KOMP)Wtsi}/Tcp

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSMUSG00000042079	Hnrnpf / Q9Z2X1 / Heteroous nuclear ribonucleoprotein F Heteroous nuclear ribonucleoprotein F, N-terminally processed / P52597* / heterogeneous nuclear ribonucleoprotein F*	/ complex
ENSMUSG00000033565	Q8BP71 / Rbfox2 / Mus musculus RNA binding protein, fox-1 homolog (C. elegans) 2 (Rbfox2), transcript variant 10, mRNA. / O43251* / RNA binding fox-1 homolog 2*	/ complex

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr