ENSG00000169045


Homo sapiens

Features
Gene ID: ENSG00000169045
  
Biological name :HNRNPH1
  
Synonyms : heterogeneous nuclear ribonucleoprotein H1 / HNRNPH1 / P31943
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q35.3
Gene start: 179614178
Gene end: 179634784
  
Corresponding Affymetrix probe sets: 201031_s_at (Human Genome U133 Plus 2.0 Array)   213470_s_at (Human Genome U133 Plus 2.0 Array)   213472_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000425732
Ensembl peptide - ENSP00000486889
Ensembl peptide - ENSP00000430970
Ensembl peptide - ENSP00000430445
Ensembl peptide - ENSP00000430156
Ensembl peptide - ENSP00000429673
Ensembl peptide - ENSP00000429661
Ensembl peptide - ENSP00000429481
Ensembl peptide - ENSP00000429270
Ensembl peptide - ENSP00000429179
Ensembl peptide - ENSP00000428620
Ensembl peptide - ENSP00000427986
Ensembl peptide - ENSP00000427845
Ensembl peptide - ENSP00000427408
Ensembl peptide - ENSP00000427388
Ensembl peptide - ENSP00000427351
Ensembl peptide - ENSP00000426726
Ensembl peptide - ENSP00000426518
Ensembl peptide - ENSP00000426275
Ensembl peptide - ENSP00000425851
Ensembl peptide - ENSP00000327539
Ensembl peptide - ENSP00000349168
Ensembl peptide - ENSP00000377082
Ensembl peptide - ENSP00000397797
Ensembl peptide - ENSP00000420850
Ensembl peptide - ENSP00000421695
Ensembl peptide - ENSP00000422955
Ensembl peptide - ENSP00000423140
Ensembl peptide - ENSP00000424087
Ensembl peptide - ENSP00000425343
NCBI entrez gene - 3187     See in Manteia.
OMIM - 601035
RefSeq - XM_017009425
RefSeq - NM_001257293
RefSeq - NM_005520
RefSeq - XM_005265895
RefSeq - XM_005265896
RefSeq - XM_005265901
RefSeq - XM_005265902
RefSeq - XM_006714862
RefSeq - XM_006714863
RefSeq - XM_011534542
RefSeq - XM_011534544
RefSeq - XM_011534545
RefSeq - XM_011534546
RefSeq - XM_011534547
RefSeq - XM_017009414
RefSeq - XM_017009415
RefSeq - XM_017009416
RefSeq - XM_017009417
RefSeq - XM_017009418
RefSeq - XM_017009419
RefSeq - XM_017009420
RefSeq - XM_017009421
RefSeq - XM_017009422
RefSeq - XM_017009423
RefSeq - XM_017009424
RefSeq Peptide - NP_001244222
RefSeq Peptide - NP_005511
swissprot - E7EN40
swissprot - E5RJ94
swissprot - E5RGV0
swissprot - E5RGH4
swissprot - D6RJ04
swissprot - D6RIU0
swissprot - D6RIT2
swissprot - D6RIH9
swissprot - D6RFM3
swissprot - D6RF17
swissprot - D6RDU3
swissprot - D6RDL0
swissprot - D6RBM0
swissprot - D6RAM1
swissprot - D6R9T0
swissprot - D6R9D3
swissprot - E7EQJ0
swissprot - G8JLB6
swissprot - H0YAQ2
swissprot - H0YB39
swissprot - H0YBD7
swissprot - H0YBG7
swissprot - H0YBK1
swissprot - P31943
swissprot - H0YBW2
swissprot - E9PCY7
Ensembl - ENSG00000169045
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnph1ENSDARG00000040881Danio rerio
 hnrnph1lENSDARG00000005551Danio rerio
 HNRNPH2ENSGALG00000031120Gallus gallus
 O35737ENSMUSG00000007850Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P55795 / HNRNPH2 / heterogeneous nuclear ribonucleoprotein H2ENSG0000012694596
HNRNPF / P52597 / heterogeneous nuclear ribonucleoprotein FENSG0000016981371
P31942 / HNRNPH3 / heterogeneous nuclear ribonucleoprotein H3ENSG0000009674649
GRSF1 / Q12849 / G-rich RNA sequence binding factor 1ENSG0000013246335
ESRP2 / Q9H6T0 / epithelial splicing regulatory protein 2ENSG0000010306729
ESRP1 / Q6NXG1 / epithelial splicing regulatory protein 1ENSG0000010441329
Q8IXT5 / RBM12B / RNA binding motif protein 12BENSG0000018380824
RBM12 / Q9NTZ6 / RNA binding motif protein 12ENSG0000024446221


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012996  Zinc finger, CHHC-type
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006396 RNA processing TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0008543 fibroblast growth factor receptor signaling pathway TAS
 biological_processGO:0016070 RNA metabolic process TAS
 biological_processGO:0043484 regulation of RNA splicing IDA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008266 poly(U) RNA binding TAS


Pathways (from Reactome)
Pathway description
FGFR2 alternative splicing
mRNA Splicing - Major Pathway
Processing of Capped Intron-Containing Pre-mRNA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000100320 O43251 / RBFOX2 / RNA binding fox-1 homolog 2  / complex
 ENSG00000169813 HNRNPF / P52597 / heterogeneous nuclear ribonucleoprotein F  / complex






 

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