ENSDARG00000039466


Danio rerio

Features
Gene ID: ENSDARG00000039466
  
Biological name :hnrnph3
  
Synonyms : heterogeneous nuclear ribonucleoprotein H3 (2H9) / hnrnph3
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein H3 / Mus musculus heteroous nuclear ribonucleoprotein H3 (Hnrnph3), transcript variant 3, mRNA. / P31942
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 22863516
Gene end: 22873184
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000157051
Ensembl peptide - ENSDARP00000057650
Ensembl peptide - ENSDARP00000101462
Ensembl peptide - ENSDARP00000123805
NCBI entrez gene - 678601     See in Manteia.
RefSeq - NM_001327924
RefSeq - XM_005156881
RefSeq Peptide - NP_001314853
swissprot - F8W523
swissprot - B8A5E1
swissprot - Q1RLP6
ZFIN ID - ZDB-GENE-060421-3878
Ensembl - ENSDARG00000039466
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HNRNPH3ENSGALG00000003947Gallus gallus
 P31942ENSG00000096746Homo sapiens
 Hnrnph3ENSMUSG00000020069Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hnrnph1l / heterogeneous nuclear ribonucleoprotein H1, like / O35737* / Q9Z2X1* / P70333* / P55795* / HNRNPF* / P31943* / P52597* / HNRNPH2* / HNRNPH1* / heterogeneous nuclear ribonucleopro...ENSDARG0000000555163
hnrnph1 / heterogeneous nuclear ribonucleoprotein H1 / Q9Z2X1* / HNRNPF* / O35737* / P31943* / P52597* / P55795* / P70333* / HNRNPH2* / heterogeneous nuclear ribonucleoprotein F* / heteroge...ENSDARG0000004088160
grsf1 / G-rich RNA sequence binding factor 1 / Q12849* / Q8C5Q4* / G-rich sequence factor 1 *ENSDARG0000005302142
esrp1 / A1L1G1 / epithelial splicing regulatory protein 1 / Q3US41* / Q6NXG1* / Mus musculus epithelial splicing regulatory protein 1 (Esrp1), transcript variant 3, mRNA.*ENSDARG0000001124534
esrp2 / epithelial splicing regulatory protein 2 / Q8K0G8* / Q9H6T0*ENSDARG0000001881432
rbm12b / RNA binding motif protein 12B / Q66JV4* / Q80YR9* / Q8IXT5* / Rbm12b1* / Rbm12b2* / RNA-binding protein 12B-A * / Mus musculus RNA binding motif protein 12 B2 (Rbm12b2), transcript...ENSDARG0000007971727
rbm12 / RNA binding motif protein 12 / Q9NTZ6* / Q8R4X3* / Gm28036* / RNA-binding protein 12 *ENSDARG0000010063627
zgc:153215ENSDARG0000005588923


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034969  hnRNPH3, RNA recognition motif 3
 IPR034970  hnRNPH3, RNA recognition motif 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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