ENSDARG00000018814


Danio rerio

Features
Gene ID: ENSDARG00000018814
  
Biological name :esrp2
  
Synonyms : epithelial splicing regulatory protein 2 / esrp2
  
Possible biological names infered from orthology : Q8K0G8 / Q9H6T0
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 34794829
Gene end: 34821836
  
Corresponding Affymetrix probe sets: Dr.200.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000142716
Ensembl peptide - ENSDARP00000142791
Ensembl peptide - ENSDARP00000015568
Ensembl peptide - ENSDARP00000069574
NCBI entrez gene - 572992     See in Manteia.
RefSeq - XM_005168986
RefSeq - XM_005168987
RefSeq - XM_021477590
RefSeq - XM_021477591
RefSeq - NM_199272
RefSeq Peptide - NP_954966
swissprot - G1K2P5
swissprot - A0A1D5NSA6
swissprot - A0A1D5NSH6
swissprot - G1K2G8
ZFIN ID - ZDB-GENE-030131-9824
Ensembl - ENSDARG00000018814
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ESRP2ENSGALG00000003374Gallus gallus
 ESRP2ENSG00000103067Homo sapiens
 Esrp2ENSMUSG00000084128Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
esrp1 / A1L1G1 / epithelial splicing regulatory protein 1 / Q3US41* / Q6NXG1* / Mus musculus epithelial splicing regulatory protein 1 (Esrp1), transcript variant 3, mRNA.*ENSDARG0000001124556
hnrnph1l / heterogeneous nuclear ribonucleoprotein H1, like / O35737* / Q9Z2X1* / P70333* / P55795* / HNRNPF* / P31943* / P52597* / HNRNPH2* / HNRNPH1* / heterogeneous nuclear ribonucleopro...ENSDARG0000000555115
hnrnph1 / heterogeneous nuclear ribonucleoprotein H1 / Q9Z2X1* / HNRNPF* / O35737* / P31943* / P52597* / P55795* / P70333* / HNRNPH2* / heterogeneous nuclear ribonucleoprotein F* / heteroge...ENSDARG0000004088114
grsf1 / G-rich RNA sequence binding factor 1 / Q12849* / Q8C5Q4* / G-rich sequence factor 1 *ENSDARG0000005302113
rbm12 / RNA binding motif protein 12 / Q9NTZ6* / Q8R4X3* / Gm28036* / RNA-binding protein 12 *ENSDARG0000010063612
rbm12b / RNA binding motif protein 12B / Q66JV4* / Q80YR9* / Q8IXT5* / Rbm12b1* / Rbm12b2* / RNA-binding protein 12B-A * / Mus musculus RNA binding motif protein 12 B2 (Rbm12b2), transcript...ENSDARG0000007971711
zgc:153215ENSDARG000000558897
hnrnph3 / heterogeneous nuclear ribonucleoprotein H3 (2H9) / P31942* / heterogeneous nuclear ribonucleoprotein H3* / Mus musculus heteroous nuclear ribonucleoprotein H3 (Hnrnph3), transcrip...ENSDARG000000394666


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012337  Ribonuclease H-like superfamily
 IPR034431  Epithelial splicing regulatory protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043484 regulation of RNA splicing IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
FGFR2 alternative splicing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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