ENSDARG00000053021


Danio rerio

Features
Gene ID: ENSDARG00000053021
  
Biological name :grsf1
  
Synonyms : G-rich RNA sequence binding factor 1 / grsf1
  
Possible biological names infered from orthology : G-rich sequence factor 1 / Q12849 / Q8C5Q4
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 42943972
Gene end: 42950963
  
Corresponding Affymetrix probe sets: Dr.22965.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124123
Ensembl peptide - ENSDARP00000125086
NCBI entrez gene - 563249     See in Manteia.
RefSeq - XM_005165334
swissprot - F8W4V6
swissprot - F8W5I2
ZFIN ID - ZDB-GENE-060825-196
Ensembl - ENSDARG00000053021
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000040232Gallus gallus
 ENSGALG00000031160Gallus gallus
 GRSF1ENSG00000132463Homo sapiens
 Grsf1ENSMUSG00000044221Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hnrnph1l / heterogeneous nuclear ribonucleoprotein H1, like / O35737* / Q9Z2X1* / P70333* / P55795* / HNRNPF* / P31943* / P52597* / HNRNPH2* / HNRNPH1* / heterogeneous nuclear ribonucleopro...ENSDARG0000000555130
hnrnph1 / heterogeneous nuclear ribonucleoprotein H1 / Q9Z2X1* / HNRNPF* / O35737* / P31943* / P52597* / P55795* / P70333* / HNRNPH2* / heterogeneous nuclear ribonucleoprotein F* / heteroge...ENSDARG0000004088129
esrp2 / epithelial splicing regulatory protein 2 / Q8K0G8* / Q9H6T0*ENSDARG0000001881423
esrp1 / A1L1G1 / epithelial splicing regulatory protein 1 / Q3US41* / Q6NXG1* / Mus musculus epithelial splicing regulatory protein 1 (Esrp1), transcript variant 3, mRNA.*ENSDARG0000001124522
rbm12b / RNA binding motif protein 12B / Q66JV4* / Q80YR9* / Q8IXT5* / Rbm12b1* / Rbm12b2* / RNA-binding protein 12B-A * / Mus musculus RNA binding motif protein 12 B2 (Rbm12b2), transcript...ENSDARG0000007971719
rbm12 / RNA binding motif protein 12 / Q9NTZ6* / Q8R4X3* / Gm28036* / RNA-binding protein 12 *ENSDARG0000010063618
zgc:153215ENSDARG0000005588915
hnrnph3 / heterogeneous nuclear ribonucleoprotein H3 (2H9) / P31942* / heterogeneous nuclear ribonucleoprotein H3* / Mus musculus heteroous nuclear ribonucleoprotein H3 (Hnrnph3), transcrip...ENSDARG0000003946614


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034424  GRSF-1, RNA recognition motif 2
 IPR034425  GRSF-1, RNA recognition motif 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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