ENSGALG00000004598


Gallus gallus

Features
Gene ID: ENSGALG00000004598
  
Biological name :CUX2
  
Synonyms : cut like homeobox 2 / CUX2
  
Possible biological names infered from orthology : Homeobox protein cut-like 2 / O14529 / P70298
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 6128724
Gene end: 6150323
  
Corresponding Affymetrix probe sets: GgaAffx.2844.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007307
Ensembl peptide - ENSGALP00000063617
NCBI entrez gene - 416875     See in Manteia.
RefSeq - XM_015275556
RefSeq - XM_015275553
RefSeq - XM_015275554
RefSeq - XM_004945582
RefSeq - XM_015275551
RefSeq - XM_015275552
swissprot - E1BXL9
swissprot - A0A1L1RXP8
Ensembl - ENSGALG00000004598
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cux2bENSDARG00000086345Danio rerio
 CUX2ENSG00000111249Homo sapiens
 Cux2ENSMUSG00000042589Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CUX1ENSGALG0000002163615
ENSGALG000000296359
ONECUT3 / one cut homeobox 3 / O60422* / Q8K557* / One cut domain family member 3 *ENSGALG000000280817
ONECUT2 / one cut homeobox 2 / O95948* / Q6XBJ3* / One cut domain family member 2 *ENSGALG000000357517
ONECUT1 / one cut homeobox 1 / O08755* / Q9UBC0* / one cut domain, family member 1*ENSGALG000000386187


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003350  CUT domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0007614 short-term memory IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0048193 Golgi vesicle transport IBA
 biological_processGO:0050775 positive regulation of dendrite morphogenesis IEA
 biological_processGO:0050890 cognition IEA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 biological_processGO:0061003 positive regulation of dendritic spine morphogenesis IEA
 biological_processGO:0071310 cellular response to organic substance IEA
 biological_processGO:2000463 positive regulation of excitatory postsynaptic potential IEA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr