ENSGALG00000004625


Gallus gallus

Features
Gene ID: ENSGALG00000004625
  
Biological name :ATXN2
  
Synonyms : ataxin 2 / ATXN2
  
Possible biological names infered from orthology : Q99700
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 6178126
Gene end: 6220003
  
Corresponding Affymetrix probe sets: Gga.13748.1.S1_at (Chicken Array)   Gga.5201.1.S1_at (Chicken Array)   Gga.6963.1.S1_at (Chicken Array)   GgaAffx.26265.1.S1_at (Chicken Array)   GgaAffx.26265.2.S1_s_at (Chicken Array)   GgaAffx.26265.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058209
Ensembl peptide - ENSGALP00000007355
NCBI entrez gene - 416877     See in Manteia.
RefSeq - XM_015275569
RefSeq - XM_015275567
RefSeq - XM_015275568
RefSeq - XM_015275557
RefSeq - XM_015275558
RefSeq - XM_015275559
RefSeq - XM_015275560
RefSeq - XM_015275561
RefSeq - XM_015275562
RefSeq - XM_015275563
RefSeq - XM_015275564
RefSeq - XM_015275565
RefSeq - XM_015275566
swissprot - F1NJL0
swissprot - A0A1D5PZ01
Ensembl - ENSGALG00000004625
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atxn2ENSDARG00000052897Danio rerio
 ATXN2ENSG00000204842Homo sapiens
 Atxn2ENSMUSG00000042605Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009604  LsmAD domain
 IPR009818  Ataxin-2, C-terminal
 IPR025852  Ataxin 2, SM domain
 IPR033093  Ataxin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002091 negative regulation of receptor internalization IEA
 biological_processGO:0010603 regulation of cytoplasmic mRNA processing body assembly IBA
 biological_processGO:0033962 cytoplasmic mRNA processing body assembly IEA
 biological_processGO:0034063 stress granule assembly IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005844 polysome IEA
 cellular_componentGO:0010494 cytoplasmic stress granule IBA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005154 epidermal growth factor receptor binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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