ENSDARG00000052897


Danio rerio

Features
Gene ID: ENSDARG00000052897
  
Biological name :atxn2
  
Synonyms : ataxin 2 / atxn2
  
Possible biological names infered from orthology : Q99700
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 41645479
Gene end: 41709234
  
Corresponding Affymetrix probe sets: Dr.12009.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000078091
NCBI entrez gene - 569210     See in Manteia.
swissprot - A2CF31
ZFIN ID - ZDB-GENE-060526-217
Ensembl - ENSDARG00000052897
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATXN2ENSGALG00000004625Gallus gallus
 ATXN2ENSG00000204842Homo sapiens
 Atxn2ENSMUSG00000042605Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atxn2l / ataxin 2-like / Q7TQH0* / Q8WWM7* / Mus musculus ataxin 2-like (Atxn2l), transcript variant 2, mRNA.*ENSDARG0000001159730


Protein motifs (from Interpro)
Interpro ID Name
 IPR009604  LsmAD domain
 IPR009818  Ataxin-2, C-terminal
 IPR025852  Ataxin 2, SM domain
 IPR033093  Ataxin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010603 regulation of cytoplasmic mRNA processing body assembly IBA
 biological_processGO:0034063 stress granule assembly IBA
 cellular_componentGO:0010494 cytoplasmic stress granule IBA
 molecular_functionGO:0003723 RNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr