ENSDARG00000011597


Danio rerio

Features
Gene ID: ENSDARG00000011597
  
Biological name :atxn2l
  
Synonyms : ataxin 2-like / atxn2l
  
Possible biological names infered from orthology : Mus musculus ataxin 2-like (Atxn2l), transcript variant 2, mRNA. / Q7TQH0 / Q8WWM7
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 15394428
Gene end: 15425689
  
Corresponding Affymetrix probe sets: Dr.3217.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115477
NCBI entrez gene - 324525     See in Manteia.
RefSeq - NM_212684
RefSeq - XM_005163799
RefSeq Peptide - NP_997849
swissprot - F1QA42
ZFIN ID - ZDB-GENE-030131-3246
Ensembl - ENSDARG00000011597
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATXN2LENSG00000168488Homo sapiens
 Atxn2lENSMUSG00000032637Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atxn2 / ataxin 2 / Q99700*ENSDARG0000005289733


Protein motifs (from Interpro)
Interpro ID Name
 IPR009604  LsmAD domain
 IPR009818  Ataxin-2, C-terminal
 IPR025852  Ataxin 2, SM domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010603 regulation of cytoplasmic mRNA processing body assembly IBA
 biological_processGO:0034063 stress granule assembly IBA
 cellular_componentGO:0010494 cytoplasmic stress granule IBA
 molecular_functionGO:0003723 RNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr