ENSG00000168488


Homo sapiens

Features
Gene ID: ENSG00000168488
  
Biological name :ATXN2L
  
Synonyms : ataxin 2 like / ATXN2L / Q8WWM7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p11.2
Gene start: 28823035
Gene end: 28837237
  
Corresponding Affymetrix probe sets: 201806_s_at (Human Genome U133 Plus 2.0 Array)   207798_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457599
Ensembl peptide - ENSP00000456812
Ensembl peptide - ENSP00000457613
Ensembl peptide - ENSP00000315650
Ensembl peptide - ENSP00000338718
Ensembl peptide - ENSP00000341459
Ensembl peptide - ENSP00000372133
Ensembl peptide - ENSP00000378917
Ensembl peptide - ENSP00000454516
Ensembl peptide - ENSP00000454588
Ensembl peptide - ENSP00000454757
Ensembl peptide - ENSP00000455427
Ensembl peptide - ENSP00000455560
Ensembl peptide - ENSP00000455981
Ensembl peptide - ENSP00000456162
Ensembl peptide - ENSP00000456752
NCBI entrez gene - 11273     See in Manteia.
OMIM - 607931
RefSeq - XM_017022892
RefSeq - XM_005255068
RefSeq - XM_005255069
RefSeq - XM_005255070
RefSeq - XM_005255071
RefSeq - XM_005255074
RefSeq - XM_005255075
RefSeq - XM_005255076
RefSeq - XM_005255077
RefSeq - XM_006721007
RefSeq - XM_006721008
RefSeq - XM_006721009
RefSeq - XM_006721010
RefSeq - XM_006721011
RefSeq - XM_006721012
RefSeq - XM_011545719
RefSeq - XM_011545721
RefSeq - XM_011545722
RefSeq - XM_017022891
RefSeq - NM_001308230
RefSeq - NM_007245
RefSeq - NM_017492
RefSeq - NM_145714
RefSeq - NM_148414
RefSeq - NM_148415
RefSeq - NM_148416
RefSeq - XM_005255061
RefSeq - XM_005255062
RefSeq - XM_005255063
RefSeq - XM_005255064
RefSeq - XM_005255065
RefSeq - XM_005255066
RefSeq - XM_005255067
RefSeq Peptide - NP_009176
RefSeq Peptide - NP_059867
RefSeq Peptide - NP_663760
RefSeq Peptide - NP_680780
RefSeq Peptide - NP_680781
RefSeq Peptide - NP_680782
RefSeq Peptide - NP_001295159
swissprot - H3BUE3
swissprot - H3BUF6
swissprot - A0A0C4DGL7
swissprot - H3BMX1
swissprot - Q8WWM7
swissprot - H3BPQ7
swissprot - H3BQ14
swissprot - H3BQX7
swissprot - H3BRB0
swissprot - H3BSK9
swissprot - H3BSQ5
Ensembl - ENSG00000168488
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atxn2lENSDARG00000011597Danio rerio
 Atxn2lENSMUSG00000032637Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ATXN2 / Q99700 / ataxin 2ENSG0000020484238


Protein motifs (from Interpro)
Interpro ID Name
 IPR009604  LsmAD domain
 IPR009818  Ataxin-2, C-terminal
 IPR025852  Ataxin 2, SM domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010603 regulation of cytoplasmic mRNA processing body assembly IDA
 biological_processGO:0034063 stress granule assembly IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0010494 cytoplasmic stress granule IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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