ENSMUSG00000032637


Mus musculus

Features
Gene ID: ENSMUSG00000032637
  
Biological name :Atxn2l
  
Synonyms : Atxn2l / Mus musculus ataxin 2-like (Atxn2l), transcript variant 2, mRNA. / Q7TQH0
  
Possible biological names infered from orthology : ataxin 2 like / Q8WWM7
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: F3
Gene start: 126491708
Gene end: 126503437
  
Corresponding Affymetrix probe sets: 10567919 (MoGene1.0st)   1438668_x_at (Mouse Genome 430 2.0 Array)   1456476_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000137108
Ensembl peptide - ENSMUSP00000132959
Ensembl peptide - ENSMUSP00000145768
Ensembl peptide - ENSMUSP00000146023
Ensembl peptide - ENSMUSP00000035415
Ensembl peptide - ENSMUSP00000125881
NCBI entrez gene - 233871     See in Manteia.
MGI - MGI:2446242
RefSeq - XM_017322209
RefSeq - XM_006507720
RefSeq - XM_006507721
RefSeq - XM_006507722
RefSeq - XM_006507723
RefSeq - XM_006507725
RefSeq - XM_006507726
RefSeq - XM_006507728
RefSeq - XM_011241775
RefSeq - NM_001347658
RefSeq - NM_183020
RefSeq Peptide - NP_898841
RefSeq Peptide - NP_001334587
swissprot - A0A0U1RPL0
swissprot - Q7TQH0
swissprot - A0A0U1RNZ9
swissprot - E9Q5Q0
swissprot - Q3TGG2
swissprot - J3QP59
Ensembl - ENSMUSG00000032637
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atxn2lENSDARG00000011597Danio rerio
 ATXN2LENSG00000168488Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Atxn2 / ataxin 2 / Q99700*ENSMUSG0000004260539


Protein motifs (from Interpro)
Interpro ID Name
 IPR009604  LsmAD domain
 IPR009818  Ataxin-2, C-terminal
 IPR025852  Ataxin 2, SM domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010603 regulation of cytoplasmic mRNA processing body assembly IEA
 biological_processGO:0034063 stress granule assembly IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0010494 cytoplasmic stress granule IEA
 cellular_componentGO:0016020 membrane ISO
 cellular_componentGO:0016607 nuclear speck ISO
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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