ENSGALG00000004834


Gallus gallus

Features
Gene ID: ENSGALG00000004834
  
Biological name :COPS3
  
Synonyms : COP9 signalosome complex subunit 3 / COPS3 / Q5ZJF1
  
Possible biological names infered from orthology : COP9 signalosome subunit 3 / O88543 / Q9UNS2
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 4767396
Gene end: 4781731
  
Corresponding Affymetrix probe sets: Gga.17786.1.S1_at (Chicken Array)   GgaAffx.12586.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007709
Ensembl peptide - ENSGALP00000064590
Ensembl peptide - ENSGALP00000064004
Ensembl peptide - ENSGALP00000062208
NCBI entrez gene - 416504     See in Manteia.
RefSeq - NM_001006163
RefSeq - XM_015294175
RefSeq - XM_015294174
RefSeq Peptide - NP_001006163
swissprot - A0A1N8W704
swissprot - Q5ZJF1
swissprot - A0A1L1RTR7
swissprot - A0A1L1S0C7
Ensembl - ENSGALG00000004834
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cops3ENSDARG00000008623Danio rerio
 COPS3ENSG00000141030Homo sapiens
 Cops3ENSMUSG00000019373Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000717  Proteasome component (PCI) domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000338 protein deneddylation IBA
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0008180 COP9 signalosome IEA


Pathways (from Reactome)
Pathway description
DNA Damage Recognition in GG-NER
Formation of TC-NER Pre-Incision Complex
Cargo recognition for clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr