ENSGALG00000004901


Gallus gallus

Features
Gene ID: ENSGALG00000004901
  
Biological name :CORO1C
  
Synonyms : CORO1C / coronin-1C isoform 1
  
Possible biological names infered from orthology : coronin 1C / Q9ULV4 / Q9WUM4
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 6589170
Gene end: 6627467
  
Corresponding Affymetrix probe sets: Gga.6229.1.S1_at (Chicken Array)   Gga.8826.1.S1_at (Chicken Array)   GgaAffx.13027.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000059518
Ensembl peptide - ENSGALP00000063729
Ensembl peptide - ENSGALP00000063295
Ensembl peptide - ENSGALP00000062334
Ensembl peptide - ENSGALP00000007822
Ensembl peptide - ENSGALP00000007824
Ensembl peptide - ENSGALP00000050575
NCBI entrez gene - 416893     See in Manteia.
RefSeq - NM_001277869
RefSeq - NM_001277868
RefSeq Peptide - NP_001264797
RefSeq Peptide - NP_001264798
swissprot - A0A1L1RU35
swissprot - Q5ZI60
swissprot - A0A1L1RL95
swissprot - A0A1D5PCT4
swissprot - F1NIQ6
Ensembl - ENSGALG00000004901
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 coro1caENSDARG00000035598Danio rerio
 coro1cbENSDARG00000021193Danio rerio
 CORO1CENSG00000110880Homo sapiens
 Coro1cENSMUSG00000004530Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CORO6 / coronin 6 / Q6QEF8* / Q920M5*ENSGALG0000002894959
CORO2B / coronin 2B / Q8BH44* / Q9UQ03*ENSGALG0000000804335
CORO2A / coronin 2A / Q8C0P5* / Q92828*ENSGALG0000000193334
CORO7 / coronin-7 / P57737* / Q9D2V7* / CORO7-PAM16* / CORO7-PAM16 readthrough*ENSGALG0000003832524


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015048  Domain of unknown function DUF1899
 IPR015505  Coronin
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR027333  Coronin 1C


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001755 neural crest cell migration IEA
 biological_processGO:0001932 regulation of protein phosphorylation IEA
 biological_processGO:0001933 negative regulation of protein phosphorylation IEA
 biological_processGO:0010632 regulation of epithelial cell migration IEA
 biological_processGO:0010633 negative regulation of epithelial cell migration IEA
 biological_processGO:0010762 regulation of fibroblast migration IEA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0044387 negative regulation of protein kinase activity by regulation of protein phosphorylation IEA
 biological_processGO:0045184 establishment of protein localization IEA
 biological_processGO:0051893 regulation of focal adhesion assembly IEA
 biological_processGO:0051895 negative regulation of focal adhesion assembly IEA
 biological_processGO:0090630 activation of GTPase activity IEA
 biological_processGO:1900024 regulation of substrate adhesion-dependent cell spreading IEA
 biological_processGO:1900025 negative regulation of substrate adhesion-dependent cell spreading IEA
 biological_processGO:1900027 regulation of ruffle assembly IEA
 biological_processGO:2000394 positive regulation of lamellipodium morphogenesis IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 cellular_componentGO:0016328 lateral plasma membrane IEA
 cellular_componentGO:0016600 flotillin complex IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0031982 vesicle IEA
 molecular_functionGO:0048365 Rac GTPase binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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