ENSGALG00000004945


Gallus gallus

Features
Gene ID: ENSGALG00000004945
  
Biological name :SLC12A1
  
Synonyms : SLC12A1 / solute carrier family 12 member 1
  
Possible biological names infered from orthology : Q13621
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 10081631
Gene end: 10127817
  
Corresponding Affymetrix probe sets: Gga.10884.1.S1_s_at (Chicken Array)   GgaAffx.26371.1.S1_at (Chicken Array)   GgaAffx.26371.2.S1_at (Chicken Array)   GgaAffx.26371.2.S1_s_at (Chicken Array)   GgaAffx.983.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007901
NCBI entrez gene - 415433     See in Manteia.
RefSeq - XM_004943799
RefSeq - XM_413814
swissprot - E1BTK6
Ensembl - ENSGALG00000004945
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc12a1ENSDARG00000098096Danio rerio
 Q13621ENSG00000074803Homo sapiens
 Slc12a1ENSMUSG00000027202Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC12A2 / solute carrier family 12 member 2 / P55011*ENSGALG0000001469063
SLC12A3 / solute carrier family 12 member 3 / P55017* / P59158*ENSGALG0000000295748
SLC12A4 / solute carrier family 12 member 4 / Q9JIS8* / Q9UP95*ENSGALG0000003417926
SLC12A7 / solute carrier family 12 (potassium/chloride transporters), member 7 / Q9WVL3* / Q9Y666* / solute carrier family 12 member 7*ENSGALG0000004239625
SLC12A9 / solute carrier family 12 member 9 / Q99MR3* / Q9BXP2*ENSGALG0000004261222
SLC12A5 / solute carrier family 12 member 5 / Q91V14* / Q9H2X9*ENSGALG0000004219920
SLC12A8 / solute carrier family 12 member 8 / A0AV02* / Q8VI23* / solute carrier family 12 (potassium/chloride transporters), member 8*ENSGALG000000120458


Protein motifs (from Interpro)
Interpro ID Name
 IPR002443  Na/K/Cl co-transporter
 IPR002445  Solute carrier family 12 member 1
 IPR004841  Amino acid permease/ SLC12A domain
 IPR004842  SLC12A transporter family
 IPR013612  Amino acid permease, N-terminal
 IPR018491  SLC12A transporter, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IBA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0015377 cation:chloride symporter activity IEA


Pathways (from Reactome)
Pathway description
Cation-coupled Chloride cotransporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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