ENSGALG00000005412


Gallus gallus

Features
Gene ID: ENSGALG00000005412
  
Biological name :SNAP47
  
Synonyms : SNAP47 / synaptosome associated protein 47
  
Possible biological names infered from orthology : Mus musculus synaptosomal-associated protein, 47 (Snap47), transcript variant 1, mRNA. / Q5SQN1 / Q8R570
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 3226148
Gene end: 3244235
  
Corresponding Affymetrix probe sets: Gga.17134.1.S1_at (Chicken Array)   GgaAffx.26493.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008677
NCBI entrez gene - 420399     See in Manteia.
RefSeq - XM_004939091
RefSeq - XM_004939093
RefSeq - XM_418505
swissprot - F1NX76
Ensembl - ENSGALG00000005412
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q0P4A7ENSDARG00000063445Danio rerio
 Q5SQN1ENSG00000143740Homo sapiens
 Q8R570ENSMUSG00000009894Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016082 synaptic vesicle priming IBA
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IBA
 biological_processGO:0060291 long-term synaptic potentiation IEA
 biological_processGO:0098967 exocytic insertion of neurotransmitter receptor to postsynaptic membrane IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IEA
 cellular_componentGO:0031083 BLOC-1 complex IEA
 cellular_componentGO:0031201 SNARE complex IBA
 cellular_componentGO:0043025 neuronal cell body IEA
 molecular_functionGO:0005484 SNAP receptor activity IBA
 molecular_functionGO:0019905 syntaxin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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