ENSGALG00000005750


Gallus gallus

Features
Gene ID: ENSGALG00000005750
  
Biological name :SWAP70
  
Synonyms : SWAP70 / switch-associated protein 70
  
Possible biological names infered from orthology : Q6A028 / Q9UH65 / switching B cell complex subunit SWAP70
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 9275434
Gene end: 9309382
  
Corresponding Affymetrix probe sets: Gga.6236.1.S1_at (Chicken Array)   Gga.6236.2.S1_s_at (Chicken Array)   Gga.6236.3.S1_at (Chicken Array)   GgaAffx.26587.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009219
NCBI entrez gene - 423044     See in Manteia.
RefSeq - NM_001031180
RefSeq - XM_015286385
RefSeq Peptide - NP_001026351
swissprot - F1N8E4
Ensembl - ENSGALG00000005750
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 swap70aENSDARG00000051819Danio rerio
 swap70bENSDARG00000057286Danio rerio
 Q9UH65ENSG00000133789Homo sapiens
 Q6A028ENSMUSG00000031015Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DEF6 / DEF6, guanine nucleotide exchange factor / Q9H4E7*ENSGALG0000000261545


Protein motifs (from Interpro)
Interpro ID Name
 IPR001849  Pleckstrin homology domain
 IPR011992  EF-hand domain pair
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007204 positive regulation of cytosolic calcium ion concentration IEA
 biological_processGO:0008064 regulation of actin polymerization or depolymerization IEA
 biological_processGO:0016444 somatic cell DNA recombination IEA
 biological_processGO:0030835 negative regulation of actin filament depolymerization IEA
 biological_processGO:0032233 positive regulation of actin filament bundle assembly IEA
 biological_processGO:0032880 regulation of protein localization IEA
 biological_processGO:0033633 negative regulation of cell-cell adhesion mediated by integrin IEA
 biological_processGO:0045190 isotype switching IEA
 biological_processGO:0051017 actin filament bundle assembly IEA
 biological_processGO:0060754 positive regulation of mast cell chemotaxis IEA
 biological_processGO:1902309 negative regulation of peptidyl-serine dephosphorylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr