ENSGALG00000006186


Gallus gallus

Features
Gene ID: ENSGALG00000006186
  
Biological name :RAD21L1
  
Synonyms : RAD21 cohesin complex component like 1 / RAD21L1
  
Possible biological names infered from orthology : A2AU37 / Double-strand-break repair protein rad21-like protein 1 / Q9H4I0 / Rad21l
  
Species: Gallus gallus
  
Chr. number: 20
Strand: -1
Band:
Gene start: 10049738
Gene end: 10061414
  
Corresponding Affymetrix probe sets: GgaAffx.3857.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000038610
NCBI entrez gene - 419269     See in Manteia.
RefSeq - XM_015296433
RefSeq - XM_015296434
RefSeq - XM_015296435
RefSeq - XM_015296436
RefSeq - XM_015296432
swissprot - E1BTU9
Ensembl - ENSGALG00000006186
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9H4I0ENSG00000244588Homo sapiens
 A2AU37ENSMUSG00000074704Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAD21 / double-strand-break repair protein rad21 homolog / O60216* / Q61550* / Double-strand-break repair * / RAD21 cohesin complex component*ENSGALG0000002952339


Protein motifs (from Interpro)
Interpro ID Name
 IPR006909  Rad21/Rec8-like protein, C-terminal, eukaryotic
 IPR006910  Rad21/Rec8-like protein, N-terminal
 IPR011991  ArsR-like helix-turn-helix domain
 IPR023093  ScpA-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0006302 double-strand break repair IEA
 biological_processGO:0007062 sister chromatid cohesion IBA
 biological_processGO:0007129 synapsis IEA
 biological_processGO:0007130 synaptonemal complex assembly IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0009566 fertilization IEA
 biological_processGO:0070197 meiotic attachment of telomere to nuclear envelope IEA
 biological_processGO:0072520 seminiferous tubule development IEA
 cellular_componentGO:0000228 nuclear chromosome IEA
 cellular_componentGO:0000794 condensed nuclear chromosome IEA
 cellular_componentGO:0000798 nuclear cohesin complex IBA
 cellular_componentGO:0000800 lateral element IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0030893 meiotic cohesin complex IEA
 cellular_componentGO:0034991 nuclear meiotic cohesin complex IEA
 molecular_functionGO:0003682 chromatin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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