ENSGALG00000029523


Gallus gallus

Features
Gene ID: ENSGALG00000029523
  
Biological name :RAD21
  
Synonyms : double-strand-break repair protein rad21 homolog / RAD21
  
Possible biological names infered from orthology : Double-strand-break repair / O60216 / Q61550 / RAD21 cohesin complex component
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 135623585
Gene end: 135647511
  
Corresponding Affymetrix probe sets: Gga.20047.1.S1_at (Chicken Array)   Gga.4474.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053960
NCBI entrez gene - 420286     See in Manteia.
RefSeq - NM_001030950
RefSeq Peptide - NP_001026121
swissprot - A0A1D5PM87
Ensembl - ENSGALG00000029523
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rad21aENSDARG00000006092Danio rerio
 rad21bENSDARG00000035655Danio rerio
 RAD21ENSG00000164754Homo sapiens
 Rad21ENSMUSG00000022314Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAD21L1 / RAD21 cohesin complex component like 1 / Q9H4I0* / A2AU37* / Rad21l* / Double-strand-break repair protein rad21-like protein 1 *ENSGALG0000000618638


Protein motifs (from Interpro)
Interpro ID Name
 IPR006909  Rad21/Rec8-like protein, C-terminal, eukaryotic
 IPR006910  Rad21/Rec8-like protein, N-terminal
 IPR011991  ArsR-like helix-turn-helix domain
 IPR023093  ScpA-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0010972 negative regulation of G2/M transition of mitotic cell cycle IEA
 biological_processGO:0045841 negative regulation of mitotic metaphase/anaphase transition IEA
 biological_processGO:0045876 positive regulation of sister chromatid cohesion IEA
 biological_processGO:0071168 protein localization to chromatin IEA
 cellular_componentGO:0000228 nuclear chromosome IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0000794 condensed nuclear chromosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0008278 cohesin complex IEA
 cellular_componentGO:0016363 nuclear matrix IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0044877 protein-containing complex binding IEA


Pathways (from Reactome)
Pathway description
Separation of Sister Chromatids
Establishment of Sister Chromatid Cohesion
Cohesin Loading onto Chromatin
Resolution of Sister Chromatid Cohesion
SUMOylation of DNA damage response and repair proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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