ENSGALG00000006409


Gallus gallus

Features
Gene ID: ENSGALG00000006409
  
Biological name :PODXL
  
Synonyms : podocalyxin like / PODXL
  
Possible biological names infered from orthology : O00592 / Q9R0M4
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 3092445
Gene end: 3133147
  
Corresponding Affymetrix probe sets: Gga.20018.1.S1_at (Chicken Array)   Gga.3341.1.S1_at (Chicken Array)   Gga.5170.1.S1_s_at (Chicken Array)   GgaAffx.3982.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000039359
NCBI entrez gene - 395755     See in Manteia.
RefSeq - XM_015289559
RefSeq - NM_001271894
RefSeq - XM_015289480
RefSeq - XM_015289512
RefSeq Peptide - NP_001258823
swissprot - F1NXC1
Ensembl - ENSGALG00000006409
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 podxlENSDARG00000031228Danio rerio
 PODXLENSG00000128567Homo sapiens
 PodxlENSMUSG00000025608Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013836  CD34/Podocalyxin
 IPR017403  Podocalyxin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0022407 regulation of cell-cell adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr