ENSGALG00000006424


Gallus gallus

Features
Gene ID: ENSGALG00000006424
  
Biological name :JADE2
  
Synonyms : JADE2 / jade family PHD finger 2
  
Possible biological names infered from orthology : Mus musculus jade family PHD finger 2 (Jade2), transcript variant 1, mRNA. / Q6ZQF7 / Q9NQC1
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 15859409
Gene end: 15899407
  
Corresponding Affymetrix probe sets: Gga.1110.1.S1_at (Chicken Array)   Gga.13940.1.A1_at (Chicken Array)   Gga.15247.1.S1_at (Chicken Array)   GgaAffx.3987.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010354
NCBI entrez gene - 416315     See in Manteia.
RefSeq - XM_015294091
RefSeq - XM_015294092
RefSeq - XM_015294093
RefSeq - XM_414632
RefSeq - XM_015294090
swissprot - E1BS98
Ensembl - ENSGALG00000006424
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 jade2ENSDARG00000053389Danio rerio
 JADE2ENSG00000043143Homo sapiens
 Jade2ENSMUSG00000020387Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
JADE1 / jade family PHD finger 1 / Q6IE81* / Q6ZPI0* / Protein Jade-1 *ENSGALG0000001021462
JADE3 / jade family PHD finger 3 / Q6IE82* / Q92613* / Protein Jade-3 *ENSGALG0000001672754
BRD1 / bromodomain containing 1 / O95696*ENSGALG0000002937926
BRPF1 / bromodomain and PHD finger containing 1 / B2RRD7* / P55201* / Peregrin *ENSGALG0000003352926
BRPF3 / bromodomain and PHD finger containing 3 / Q9ULD4*ENSGALG0000000077623
MLLT10 / MLLT10, histone lysine methyltransferase DOT1L cofactor / O54826* / P55197* / myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10*ENSGALG0000000792821
PHF14 / PHD finger protein 14 / O94880* / Q9D4H9*ENSGALG0000003804120
MLLT6 / MLLT6, PHD finger containingENSGALG0000003469310


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019542  Enhancer of polycomb-like, N-terminal
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0050767 regulation of neurogenesis IEA
 biological_processGO:0050769 positive regulation of neurogenesis IEA
 biological_processGO:0051865 protein autoubiquitination IEA
 biological_processGO:0060395 SMAD protein signal transduction IEA
 biological_processGO:1990138 neuron projection extension IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr