ENSMUSG00000020387


Mus musculus

Features
Gene ID: ENSMUSG00000020387
  
Biological name :Jade2
  
Synonyms : Jade2 / Mus musculus jade family PHD finger 2 (Jade2), transcript variant 1, mRNA. / Q6ZQF7
  
Possible biological names infered from orthology : jade family PHD finger 2 / Q9NQC1
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B1.3
Gene start: 51813455
Gene end: 51857653
  
Corresponding Affymetrix probe sets: 10385747 (MoGene1.0st)   1430081_at (Mouse Genome 430 2.0 Array)   1455345_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020655
Ensembl peptide - ENSMUSP00000104718
Ensembl peptide - ENSMUSP00000104719
NCBI entrez gene - 76901     See in Manteia.
MGI - MGI:1924151
RefSeq - XM_017314832
RefSeq - NM_001357588
RefSeq - NM_199299
RefSeq - XM_006534468
RefSeq - XM_006534469
RefSeq - XM_006534470
RefSeq - XM_011249309
RefSeq - XM_006534466
RefSeq Peptide - NP_001344517
RefSeq Peptide - NP_955003
swissprot - Q6ZQF7
swissprot - A2AA59
Ensembl - ENSMUSG00000020387
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 jade2ENSDARG00000053389Danio rerio
 JADE2ENSGALG00000006424Gallus gallus
 JADE2ENSG00000043143Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Jade1 / Q6ZPI0 / Protein Jade-1 / Q6IE81* / jade family PHD finger 1*ENSMUSG0000002576450
Jade3 / Q6IE82 / Protein Jade-3 / Q92613* / jade family PHD finger 3*ENSMUSG0000003731540
Brpf3 / bromodomain and PHD finger containing, 3 / Q9ULD4*ENSMUSG0000006395220
Brd1 / bromodomain containing 1 / O95696*ENSMUSG0000002238720
Brpf1 / B2RRD7 / Peregrin / P55201* / bromodomain and PHD finger containing 1*ENSMUSG0000000163220
Mllt6 / MLLT6, PHD finger containingENSMUSG0000003843718
Mllt10 / O54826 / myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 / P55197* / MLLT10, histone lysine methyltransferase DOT1L cofactor*ENSMUSG0000002674317
Phf14 / Q9D4H9 / PHD finger protein 14 / O94880*ENSMUSG0000002962916


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019542  Enhancer of polycomb-like, N-terminal
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR034732  Extended PHD (ePHD) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IMP
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043966 histone H3 acetylation ISS
 biological_processGO:0043981 histone H4-K5 acetylation ISO
 biological_processGO:0043982 histone H4-K8 acetylation ISO
 biological_processGO:0043983 histone H4-K12 acetylation ISO
 biological_processGO:0050767 regulation of neurogenesis IGI
 biological_processGO:0050769 positive regulation of neurogenesis IMP
 biological_processGO:0051865 protein autoubiquitination IDA
 biological_processGO:0060395 SMAD protein signal transduction IDA
 biological_processGO:1990138 neuron projection extension IGI
 cellular_componentGO:0000123 histone acetyltransferase complex ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IDA


Pathways (from Reactome)
Pathway description
HATs acetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr