ENSGALG00000006427


Gallus gallus

Features
Gene ID: ENSGALG00000006427
  
Biological name :CARS
  
Synonyms : CARS / Cysteine--tRNA ligase, cytoplasmic / Q5F408
  
Possible biological names infered from orthology : cysteinyl-tRNA synthetase / P49589 / Q9ER72
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 13069629
Gene end: 13105290
  
Corresponding Affymetrix probe sets: GgaAffx.21941.1.S1_at (Chicken Array)   GgaAffx.21941.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010362
NCBI entrez gene - 423086     See in Manteia.
RefSeq - XM_015286589
RefSeq - NM_001012583
RefSeq - XM_015286586
RefSeq - XM_015286587
RefSeq - XM_015286588
RefSeq - XM_015286585
RefSeq Peptide - NP_001012601
swissprot - Q5F408
swissprot - F1P1D9
Ensembl - ENSGALG00000006427
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 carsENSDARG00000036164Danio rerio
 CARSENSG00000110619Homo sapiens
 CarsENSMUSG00000010755Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CARS2 / cysteinyl-tRNA synthetase 2, mitochondrial / Q9HA77* / cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)*ENSGALG0000001684719


Protein motifs (from Interpro)
Interpro ID Name
 IPR009080  Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR015803  Cysteine-tRNA ligase
 IPR024909  Cysteinyl-tRNA synthetase/mycothiol ligase
 IPR032678  tRNA synthetases class I, catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006423 cysteinyl-tRNA aminoacylation ISS
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004817 cysteine-tRNA ligase activity ISS
 molecular_functionGO:0005524 ATP binding IBA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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